Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst6g01106 | ATGTGTGAGGGTGTTGTGTATGCTGCATCTCTTGCAATTTTCTGTTTGTTGGTGATATTATTGTGGGTATTGTGTTGGATAGCATGGCTACTGTATGCACGCCACGCGCAAACCGCACCAACCACACCCATCCAAGACATTGAGTCTGCTCAGCAACCCGGTTCAGGTCCAGCAAGAGCGAACGTTGCTTTGCAGATTGCCGCAACGAGAGGTCGAAGAACACTTTGGCGTGAAACGCTGATGTATTTCGCCCCCAAAGCAGAGATTTCGAGGCTTGCCGTCAGAGCCTTGCCTCCTGCTGCACCCTTCCAGGAGGATGAAGCCAGTACTCAATCTGAGTGCCCTATTTGCCTCGAAGATTTTATCAATCAAGAGTTAGTCCAACCTTTTGGAGTTTGCCTTCATCTATTTCATGCCCCTTGCATAAACTCTTGGTTACTCCAGGCTAATACTACTTGTCCAGTTTGTCGCAAGGAATTGACAATTAATCCCTAG | 495 | 0.4788 | MCEGVVYAASLAIFCLLVILLWVLCWIAWLLYARHAQTAPTTPIQDIESAQQPGSGPARANVALQIAATRGRRTLWRETLMYFAPKAEISRLAVRALPPAAPFQEDEASTQSECPICLEDFINQELVQPFGVCLHLFHAPCINSWLLQANTTCPVCRKELTINP | 164 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst6g01106 | 164 | SMART | ring_2 | 114 | 156 | IPR001841 | - | |
Spst6g01106 | 164 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 89 | 163 | IPR013083 | - | |
Spst6g01106 | 164 | ProSiteProfiles | Zinc finger RING-type profile. | 114 | 157 | IPR001841 | - | |
Spst6g01106 | 164 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 10 | 160 | IPR044675 | - | |
Spst6g01106 | 164 | Pfam | Ring finger domain | 113 | 157 | IPR001841 | - | |
Spst6g01106 | 164 | SUPERFAMILY | RING/U-box | 98 | 162 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst6g01106 | Spst-Chr6 | 10061670 | 10062164 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst6g01106 | 5 | 160 | C3H Transcription Factor Family | AT1G53010 | 30.723 | 1.76e-13 | 63.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst6g01106 | - | - | aprc:113865236 | 99.3673 |