Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01099 ATGGGTTGTGTCCATGGTAAGTGTTGTACCCGTTACCCTTCACCATCAGTGGGTGGCTCCAGAGACTTAAGAGAACTTGGCCCTTACAGTGTCCAAAGGAAGCACATTCTTACTCAGAGTTCACTGCAATTTGTTCCTGTCCCTTCACATAACTTCACTTTGGAATACTCTGTGCTCACTCAGAGGGGCTACTATCCTGATTCACCTGATAAAGAAAACCAGGATAGTTTCTGCATTAGGACACAGTTCCAAGGTAACCAGAGTGTCCATTTCTTTGGTGTCTATGATGGGCATGGCGAATTCGGTGCCCAGTGTTCAAACTTTGTTAAAGATAGATTGGTGGAAAATTTGTCTAGTGACATTGCATTATTGGAGGACCCTGTTAAGGCTTACACTTCTGCATTCTTGACCACAAATGAGGACTTGCATAAGAATGAGATTGATGATTCCTTGAGTGGCACCACTGCAATTACGGTGCTGGTTATTGGGGATACCCTTTATGTTGCTAATGTTGGTGATTCCAGAGCGGTGATGGCTGTTAAGGATGGGAACCGGATTGTTGCTGAGGACTTGTCTTCTGATCAGACACCATTTAGGAGAGATGAGTATGGAAGAGTGAAGCTTTGTGGGGCAAGGGTTTTGAGTGTTGATCAGGTGGAAGGGCATAAGGATCCGGATATTCAGACTTGGGGTGACGAAGAGAGTCAGGGTGATGATCCTCCTAGGTTGTGGGTTCAGAATGGGATGGTTCCTGGAGCTGCATTTACAAGGAGTGTAGGGGATAAGTTGGCTGAAACTATTGGTGTCATTGCTGTTCCTGAGGTGTCAACGGTTCAGCTTACACCTAACCATCTTTTCTTTGTTGTTGCAAGCGATGGTGTATTTGAGTTCCTATCCAGCCAAAATGTTGTTGATATGGCAGCAAGTTATTCAGACCCCCGTGATGCATGTGCTGCCATTGCTGGAGAATCTTATAAACTATGGTTAGAACATGAGGGTCGAACAGATGATATAACAATTATTATTGTTCAGATCAAAGGCCTGTCTAATTCAGGTACATCAGGACTTGGATCTGGTGAGATCAATGTCAGTACTGTAACAAGGAGCAAGAGCAAGAGGGTAAAGGGTGCATCTGAAATATCTGCCACTACTGGGCTGGATGTTTATCGTTCAGTAAGGAATGGCTTCTCTGATTTACAGCCCTGTCCACAGCACGTGGTCTCAACTAGAAGCCCAGCCATAGTGGTCCCTTCTCCTCCAGCATGTCAAACATCAATAGAATTGGTACAGTCACACTAG 1299 0.4496 MGCVHGKCCTRYPSPSVGGSRDLRELGPYSVQRKHILTQSSLQFVPVPSHNFTLEYSVLTQRGYYPDSPDKENQDSFCIRTQFQGNQSVHFFGVYDGHGEFGAQCSNFVKDRLVENLSSDIALLEDPVKAYTSAFLTTNEDLHKNEIDDSLSGTTAITVLVIGDTLYVANVGDSRAVMAVKDGNRIVAEDLSSDQTPFRRDEYGRVKLCGARVLSVDQVEGHKDPDIQTWGDEESQGDDPPRLWVQNGMVPGAAFTRSVGDKLAETIGVIAVPEVSTVQLTPNHLFFVVASDGVFEFLSSQNVVDMAASYSDPRDACAAIAGESYKLWLEHEGRTDDITIIIVQIKGLSNSGTSGLGSGEINVSTVTRSKSKRVKGASEISATTGLDVYRSVRNGFSDLQPCPQHVVSTRSPAIVVPSPPACQTSIELVQSH 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01099 432 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 50 347 - -
Spst6g01099 432 SUPERFAMILY PP2C-like 44 347 IPR036457 -
Spst6g01099 432 CDD PP2Cc 71 345 IPR001932 -
Spst6g01099 432 Pfam Protein phosphatase 2C 73 320 IPR001932 -
Spst6g01099 432 PANTHER PROTEIN PHOSPHATASE 73 344 IPR015655 GO:0004722|GO:0006470
Spst6g01099 432 Gene3D - 47 347 IPR036457 -
Spst6g01099 432 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Spst6g01099 432 SMART PP2C_4 51 343 IPR001932 -
Spst6g01099 432 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01099 Spst-Chr6 10011591 10014498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01099 1 350 PP2C-type Phosphatase Gene Family AT3G06270 72.000 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01099 - - gsj:114373061 810.061
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01099 6 10011591 10014498 Spst6g01099 6 10011591 10014498 ECH
Spst3g03128 3 81216425 81218675 Spst6g01099 6 10011591 10014498 PCT