Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01081 ATGGATTTCGACGAAGGGAAGCGAAGTTGCAGAAGGAAGTTAGAGCGGCATAACACGCGAAGGCGGAGAAAGCCTCCGGTGGACTCCGGGGGTACTGCTCACGGCGAACAGGAAGCTGTTACTGAGAATGAGGAAAACAATTATGATGCGGAAGCAGGAAAAGATTGTTCAAATTTGAGTACTGAGATCAACGAGATAGTACTGTTGCCAGATCATGAACATGAACCTGTTCCCACTCTGAGAGCGGATCCATATGCCCAGAATGTTAATAGTGATAATGTTGTGTCTTTGGTTGTTTCCGGCGAAACGCGAGTGAATAGTGGGAACACTTCTAATTCGCCTTCTTATTGTGATAATAAGAGTGCCTACACGTCTATGTGTCAAACAGGTCGAATTTCGTTTAAGCTTTATGATTGGAATCCTGCGGAATTTCCTAGAAGGCTACGACACCAAATATTTGAATGGTTGGCAAGTATGCCTGTAGAGTTGGAGGGTTATATTCGTCCTGGGTGCACGATCCTGACAATTTTTATTGCAATGCCTAACATTATGTGGATAAATTTACGGAAAGACTCGTTGGAATATGTAAACGATCTTGTTGCTCCTGGAAAGATGCTATCTGGAAGAGGGACTGCGCTAGTTCATCTGAATGACATAATCTTCCGTGTTATGAAAGATGGAACTTCTCTGACGAAAGTCGAGGTAAACTTGCAGGCTCCGAGGCTTCACTATGTTCATCCCACATGCTTTGAGGCTGGCAAACCTATGGAGTTTGTTGCTTGTGGAAGTAACTTGCTGCAGCCTAAATTTCGGCTTCTTGTATCATTTTCTGGAAAGTATCTGAAATATGAGTATTGTGTACCATCTCCACATAAATGGACTGAAGACAATATTTCTTGTGCTTTTGACGATCAGTTATACAAGATATATGTCCCTCATACAGAGGAAAGTCTCTTTGGGCCTGCATTTATTGAGGTGGAGAACGAGTCTGGTTTATCAAACTTTATTCCTGTACTCATTGGGGATAAAGAAATTTGTTCTGAAATGAAGACACTGCAGCAAAAATTAGATTTATCGCTCCTTTCTAAACAATTCCGGTCTGCATCTGATGGTTCTATCTGCAGCTCGTGTGAAACATTTGCACTTAGTCACACATCATCAGACTTACTTGTAGATATTGCATGGTTGATTAAGGACAACACTTCAGAATTTTTTGACAGAGTGATGACAGCTTCACAAATCCAAAGATATTGTCATTTGTTGGATTTTCTGATGTGCAATGATTCAACAATCATTTTGGAAAAAATATTACCAAATTTGATAACCTTGACAGAAGGCATGAAATCCAACTTTGTGATTAATAGGATGAGTGATATTCATACATCGCAAATCCTGAATCAAATACATAATGCTAAAAATGCCATATATCAGAAACATCCGAAAAATGGAAGTATAATTGTGCTCTCTGAAATGAAAGACTTTAAACTTGCTCAGGGCTGCTCCCAAGATAACAAGCTCCCAGTTGCAGTTAACAGTCAGGGTATCCTGTCAAGAGCAGATGCGAAGTGGGGAATACTGAAAAGTCTAACTTCTAATGACAAAAATGAAAGAATACCTCTTCTGAAGAGAGATATTATAATGAATGTGGAAGAGTTGCCTGAAAGATATGGTCGTGGATGTTTGGGCAGGGGGTTCTTGATCTCTCGACCAGCGATTTTTGTAATTGTTTCGATTGCTGTTTGTCTTGGGGTTTGTGTAGCTGTCCTTCATCCTGGAAGGGTTACTGAGTTAGCAGTATCCGTTAGAAGGTGTTTGTTTAACTATTAG 1827 0.4039 MDFDEGKRSCRRKLERHNTRRRRKPPVDSGGTAHGEQEAVTENEENNYDAEAGKDCSNLSTEINEIVLLPDHEHEPVPTLRADPYAQNVNSDNVVSLVVSGETRVNSGNTSNSPSYCDNKSAYTSMCQTGRISFKLYDWNPAEFPRRLRHQIFEWLASMPVELEGYIRPGCTILTIFIAMPNIMWINLRKDSLEYVNDLVAPGKMLSGRGTALVHLNDIIFRVMKDGTSLTKVEVNLQAPRLHYVHPTCFEAGKPMEFVACGSNLLQPKFRLLVSFSGKYLKYEYCVPSPHKWTEDNISCAFDDQLYKIYVPHTEESLFGPAFIEVENESGLSNFIPVLIGDKEICSEMKTLQQKLDLSLLSKQFRSASDGSICSSCETFALSHTSSDLLVDIAWLIKDNTSEFFDRVMTASQIQRYCHLLDFLMCNDSTIILEKILPNLITLTEGMKSNFVINRMSDIHTSQILNQIHNAKNAIYQKHPKNGSIIVLSEMKDFKLAQGCSQDNKLPVAVNSQGILSRADAKWGILKSLTSNDKNERIPLLKRDIIMNVEELPERYGRGCLGRGFLISRPAIFVIVSIAVCLGVCVAVLHPGRVTELAVSVRRCLFNY 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01081 608 SUPERFAMILY SBT domain 2 26 IPR036893 GO:0003677|GO:0005634
Spst6g01081 608 ProSiteProfiles Zinc finger SBP-type profile. 1 24 IPR004333 GO:0003677
Spst6g01081 608 MobiDBLite consensus disorder prediction 1 55 - -
Spst6g01081 608 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 3 362 IPR044817 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01081 2 602 SBP-box Gene Family AT5G18830 44.944 3.39e-172 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01081 - - gmx:100776034 1033.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01081 6 9893603 9901070 Spst6g01081 6 9893603 9901070 ECH