Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01074 ATGTTGCCTCGTGCAGTGAAGGGTTTGTATAAACGGGTGGAGGAGTTCTACACCAACCCCATTCAAAGCAGGGTTAATCTGAATGTGCAGACTGTAATATTTTGGGGGACTGTTGTTGATGTGCTTGGTCATAGCACTCCCTTTCAGGTTTTGAAATCTGGATTTTTAATGGAGTGCAATAAAGAAGAAGCCGTAAGGGCCAAGGAAATTGCTGAAAAGAAAATGCAAAACAAAGATTTTAATGGGGCTCGAAAATTTGCTCTTAAGGCTCAGCAGCTATATCCTGATTTGGAGAATATTAATCAAATGCTTATTGTTTGCGATGTTCATTTCTCTGCTGAGCAGAAATTGTTTGGCAATGAGATGAACTGGTATAAAATTCTTCAAATTGAGCTGACGGCTAATGATACAACAATTAAGAAGCAATATAGGAAGTTAGCCCTCCAACTTCATCCTGACAAAAACAAGTTTGCTGGTGCAGAAGCTGCATTTAAGCTGATTGGGGAAGCTCAAAGAGTTCTTTTGGATAGAGAAAAACGAGATAGGCTTGACATAAGTTTGCGCAGGGTTCCAATGAACAGAACTACTGTGCCATCTCATCATCAGCAGAATGTTCAGATGAATTTTAATCCTGTGATGCAAACCAGTGTCAGACCCAATTTTACAAACTTAAATCCTCACCAGCAACAACAGAGTAGGCAGACATCTCATCAGGGGCTTAATGGTGTCCGCCCTACTTTTTGGACTGTATGCTCTTTTTGTTCTGTTAGATATGAGTATTATAGGGAAGTTTTAAACAGATCTCTTCGCTGTCAACATTGCAATAGGCCCTTCATTGCATATGATGTTAATATGCAAGGTACAACACCAGCAACTAATTCAAGTCATCAAGCTTTTGGTGCACAGAACTATAGTCAGAATCATGGTGCTTTCAATATTGGTGTTGGATCTCAAGGTAATTTGCATACTCGCAGATCAAATACAGAATCACATCAGAAAAAAGATCCTACTGAGGATGTCCCTGTAAAGCCAAATGAAAAGAGAAGGAGAAAGCGGGCAGCTGAATCCAGTGAAAGTTCTGAATCTGTAGGCAGCACTGATTCTGAATCAGAAGAGGATGTTCGTTATGACAATGATGGTGTTCCTGGTATTTCTACTCATAGAGAAGAGAATCCACGTAGATCTACACGGCAAAAGCACCAGGTTTCCTACAAGGAGAATGTGAGTGATGATGAAGGGAGTGGATCTCCATCTGGTTCTGGTAAACAAGAGCCTGGGGAGGCAGCTAACATTAATGAACAGAATGGTTTGGTTGCTGATCAGAAAGGAGATCAGCCGGGAGTAAAGCGGAAGGAGAGCTTTTATTTTGAAGAGAGCATTCAAAATATAAAAGAGGAGCTTAAGGAGACGAGGGAAAAAGAGGCAGTGGTTAGCCCAAAGACTGACAAAGCTTCAGAGCATTCACCCTCGAAATCATCAAATCAACCAGATAATTTCGTTTATCCAGATGCAGAATTTAGTGACTTTGACAAAGATAAGACAGAGGGGTCTTTTGCTGTTGGGCAGATTTGGGCTATTTATGATACTATAGATGGTATGCCTCGATTCTATGCTATAATCAGAAAAGTTCTCTCTCCTGGATTCAATTTGCGGATAACATGGTTTGAACCAGATCCAGAAGAAAGAGACGAAATCCACTGGGTAAATGAGCAATTGCCAGTTGCTTGTGGGAAACATAAACTTGGTAATACAGAGACCACTGAAGATCGATTGATGTTCTCTCATCTTATTGTCTGTGAAAAGATTGGCCGCAGTACTTACAAAGTATATCCTAGAATGGGAGAAACTTGGGCTCTTTTTAAAAATTGGGATATCAAATGGCATATGAATGCGGAGTCTCATCGGCAGTATGATTTTGAATTTGTCGAAATCTTGTCAAATTACGTTGAAGGTGTGGGAGTACTTGTTGCATACTTGGCTAAGTTGAAAGGTTTTGTGTCTCTCTTCTCTCGAATGGATGGAGACAAGCATACTATTCAAATTCCATCAGCTGAGTTATTCAGATTCTCTCACAGGGTTCCATCTTTTAAAATGACTGGTCAGGAAAGAGTTGGTGTTCCTGTAGGGTCTTATGAACTTGATCCTGTATCCTTGCCAATGAATATTGAAGAAATTTCTGTTCCTGTAGACGTGGAAGTAAAGGTTGGTCATTGTCCATCTAGCGGGAATGACACAAGGTCTTCAGATATGTCAAAATTCGCAATGTGTTCGGAGGGATATGCAACTTTGAGAAGAAGCAACTTTTCAGAGGAGAACAAGGATCCCATTGATCATATTAGTAGTGATCCTTCAGCCTCAGCTGCCGATGCTTTTGAAATTCCAGATCCCGAGTTTTACAATTTTGATGCTGGGAGGTCCCTTGAAAAGTTTGAGGTTGGTCAGATTTGGGCATTTTATGGGGATGAGGATGGACTACCAAAATACTATGGTCTGATTAAGAAGATTAGTACTAGTCCAGAACTTGAGTTGCAAGTTACTTATCTTACTAACTGCTGGCTACCGGAGGACAGTGTCAGATGGGAAGATAAAGAGATGCTTGTTTCCATTGGAAGATTTAAAATCATAACAGGTGCTCGTCCCTACATTTATACTAACACCTATTCTATTTCACATCAGGTGCAAACTATTACTGACTGTAAGAAGAAGAAGGAATATGAAATTCTTCCAAGGAAAGGTGAAATTTGGGCATTGTATAAGGATTGGACCACTAAAATAAAACGTTCTGATCTGGAAAACTTGGAGTATGACATAGTGGAAGTTGTTGGAGAAAATGATTTGTGGATGGAAGTCGTCCCTTTGGAGTTGGTAAGTGGTTATAATTCAGTTTTTAAGGGCAAATCGAATGCAGGATCAGCTAGGAGCGTGAAAATATTCTGGAAAGAGTTGCTCAGGTTCTCCCACCAAATCCCTGCCTTCAAACTATCAGAAGAACACGGTGGCAATCTGAGAGGCTTCTGGGAGCTTGATCCGGGAGCACTACCCGTTCATTATTTTAGCAACAAATAA 3066 0.4048 MLPRAVKGLYKRVEEFYTNPIQSRVNLNVQTVIFWGTVVDVLGHSTPFQVLKSGFLMECNKEEAVRAKEIAEKKMQNKDFNGARKFALKAQQLYPDLENINQMLIVCDVHFSAEQKLFGNEMNWYKILQIELTANDTTIKKQYRKLALQLHPDKNKFAGAEAAFKLIGEAQRVLLDREKRDRLDISLRRVPMNRTTVPSHHQQNVQMNFNPVMQTSVRPNFTNLNPHQQQQSRQTSHQGLNGVRPTFWTVCSFCSVRYEYYREVLNRSLRCQHCNRPFIAYDVNMQGTTPATNSSHQAFGAQNYSQNHGAFNIGVGSQGNLHTRRSNTESHQKKDPTEDVPVKPNEKRRRKRAAESSESSESVGSTDSESEEDVRYDNDGVPGISTHREENPRRSTRQKHQVSYKENVSDDEGSGSPSGSGKQEPGEAANINEQNGLVADQKGDQPGVKRKESFYFEESIQNIKEELKETREKEAVVSPKTDKASEHSPSKSSNQPDNFVYPDAEFSDFDKDKTEGSFAVGQIWAIYDTIDGMPRFYAIIRKVLSPGFNLRITWFEPDPEERDEIHWVNEQLPVACGKHKLGNTETTEDRLMFSHLIVCEKIGRSTYKVYPRMGETWALFKNWDIKWHMNAESHRQYDFEFVEILSNYVEGVGVLVAYLAKLKGFVSLFSRMDGDKHTIQIPSAELFRFSHRVPSFKMTGQERVGVPVGSYELDPVSLPMNIEEISVPVDVEVKVGHCPSSGNDTRSSDMSKFAMCSEGYATLRRSNFSEENKDPIDHISSDPSASAADAFEIPDPEFYNFDAGRSLEKFEVGQIWAFYGDEDGLPKYYGLIKKISTSPELELQVTYLTNCWLPEDSVRWEDKEMLVSIGRFKIITGARPYIYTNTYSISHQVQTITDCKKKKEYEILPRKGEIWALYKDWTTKIKRSDLENLEYDIVEVVGENDLWMEVVPLELVSGYNSVFKGKSNAGSARSVKIFWKELLRFSHQIPAFKLSEEHGGNLRGFWELDPGALPVHYFSNK 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01074 1021 SMART dnaj_3 122 179 IPR001623 -
Spst6g01074 1021 Pfam Domain of unknown function (DUF3444) 790 997 IPR024593 -
Spst6g01074 1021 Pfam Domain of unknown function (DUF3444) 497 702 IPR024593 -
Spst6g01074 1021 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 57 751 - -
Spst6g01074 1021 MobiDBLite consensus disorder prediction 368 407 - -
Spst6g01074 1021 MobiDBLite consensus disorder prediction 408 439 - -
Spst6g01074 1021 ProSiteProfiles dnaJ domain profile. 123 187 IPR001623 -
Spst6g01074 1021 Pfam DnaJ domain 123 184 IPR001623 -
Spst6g01074 1021 CDD DnaJ 123 176 IPR001623 -
Spst6g01074 1021 PRINTS DnaJ domain signature 159 179 IPR001623 -
Spst6g01074 1021 PRINTS DnaJ domain signature 143 158 IPR001623 -
Spst6g01074 1021 PRINTS DnaJ domain signature 125 143 IPR001623 -
Spst6g01074 1021 MobiDBLite consensus disorder prediction 466 505 - -
Spst6g01074 1021 MobiDBLite consensus disorder prediction 309 325 - -
Spst6g01074 1021 MobiDBLite consensus disorder prediction 309 453 - -
Spst6g01074 1021 MobiDBLite consensus disorder prediction 466 487 - -
Spst6g01074 1021 SUPERFAMILY Chaperone J-domain 120 201 IPR036869 -
Spst6g01074 1021 Gene3D DnaJ domain 120 237 IPR036869 -
Spst6g01074 1021 MobiDBLite consensus disorder prediction 326 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01074 Spst-Chr6 9835926 9840148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01074 60 283 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 37.118 3.96e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01074 - - gmx:100779228 1566.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01074 6 9835926 9840148 Spst6g01074 6 9835926 9840148 ECH
Spst3g03101 3 80862023 80864893 Spst6g01074 6 9835926 9840148 PCT