Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01066 ATGGGGTGTGCGTTTGGAAGAGAGTCTTCGAGGGAGGAGAGGAGAGAGCACGTGAGAGAGGCAAAAGCTGAAGTGGGTAGAGCAGAGGTTGTTGAGAATGAGAGCATTGAGAAGGAGAAGGAGGGTGGAAGAGAGGAGAAGAGGACAAGGGCAAGGGGAGAGAGGAGGCGATCTTCGAAGCCGAATCCGAGGTTGAGCAATCCACCTAACCATGTTCATGGTGAGCAGGTTGCAGCAGGGTGGCCCTCTTGGCTCTCTAAGGTTGCTGGTGAAGCCATCAATGGATTGACCCCTCGGAGGGCTGACACCTTTGAGAAGCTTGATAAGATCGGGCAAGGTACATACAGCAATGTCTACAAAGCTAGGGATACTTTGACGGGGAAAATTGTAGCTCTAAAGAAGGTCCGTTTTGACAATTTGGAGCCTGAAAGTGTGAAGTTCATGGCTAGAGAGATTTTGATTCTCCGTCGTCTGGATCATCCCAATGTCATCAAACTGGAAGGCTTAGTGACTTCTAGAATGTCATGCAGTTTATATCTTGTATTTGAATACATGGTGCATGATCTGGCTGGACTTGCCACAAACCCGGCAATTAAGTTCACAGAATCTCAGGTAAAATGTTACATGCATCAGCTATTTTCTGGACTGGAGCACTGTCACAACCGTCATGTGTTGCATCGGGATATAAAGGGGTCAAACCTTCTTATTGATAATGACGGAATTCTTCGGATTGCTGATTTTGGATTAGCATCCTTCTATGATCCTAATCACAAGCACCCTATGACTAGTAGAGTGGTTACCTTATGGTATCGACCTCCGGAACTTCTTCTTGGGGCCACTGAATATAGTGTAGGAGTGGACCTCTGGAGTGCTGGCTGCATTCTTGCTGAATTATTGGCTGGAAAACCTATTATGCCTGGTCGAACGGAGGTGGAACAACTACACAAGATATTTAAGCTATGTGGTTCTCCTTCCGACGAATATTGGAAAAAATCAAAGTTGCCACATGCTACCATTTTTAAGCCCCAGCAGTCATACAAGCGATGTATTGCGGAGACATTTAAGGATTTTCCTCCATCGTCACTGCCACTTATTGACACCCTTCTCTCAATTGATCCAGATGAACGTTTGACTGCCACTGCTGCATTACATAGTGAATTCTTTACTACAAAACCATATGCCTGTGATCCCTCTAGCCTTCCCAAATATCCTCCCAGCAAGGAGATGGATGCAAAGCTAAGGGATGAAGAAGCTAGAAGATTGAGAGCAGCTGGTAAAGCCAATGCTGATGGTGTAAAGAAATCACGGCCACGTGAGCGAGTTGGGCGGGGAATTCCAGTTCCAGAGGCCAATGCTGAACTGCAAGCAAATATTGATAGGCGGCGACTGATCACACATGCAAATGCAAAGAGCAAGAGTGAGAAGTTTCCTCCTCCCCACCAAGATGGAGCTCTAGGCTATCCACTGGGATCATCACATCACATGGATCCAGTTTTTGATCCTCCTGATGTTCCATTCAGTTCCACAAACTTCTCACAACCTAAAGCAAATATACAAACCTGGTCTGGCCCATTGGTAGATCCTTCTGGTGTGGGCGCACCAAGGAGAAAGAAGAAACATGGCAAGTGA 1629 0.4641 MGCAFGRESSREERREHVREAKAEVGRAEVVENESIEKEKEGGREEKRTRARGERRRSSKPNPRLSNPPNHVHGEQVAAGWPSWLSKVAGEAINGLTPRRADTFEKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMVHDLAGLATNPAIKFTESQVKCYMHQLFSGLEHCHNRHVLHRDIKGSNLLIDNDGILRIADFGLASFYDPNHKHPMTSRVVTLWYRPPELLLGATEYSVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSDEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIDTLLSIDPDERLTATAALHSEFFTTKPYACDPSSLPKYPPSKEMDAKLRDEEARRLRAAGKANADGVKKSRPRERVGRGIPVPEANAELQANIDRRRLITHANAKSKSEKFPPPHQDGALGYPLGSSHHMDPVFDPPDVPFSSTNFSQPKANIQTWSGPLVDPSGVGAPRRKKKHGK 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01066 542 SUPERFAMILY Protein kinase-like (PK-like) 99 394 IPR011009 -
Spst6g01066 542 Gene3D Phosphorylase Kinase; domain 1 92 186 - -
Spst6g01066 542 ProSiteProfiles Protein kinase domain profile. 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01066 542 MobiDBLite consensus disorder prediction 423 443 - -
Spst6g01066 542 CDD STKc_CDK9_like 104 388 - -
Spst6g01066 542 Gene3D Transferase(Phosphotransferase) domain 1 187 427 - -
Spst6g01066 542 PANTHER CELL DIVISION PROTEIN KINASE 102 392 - -
Spst6g01066 542 MobiDBLite consensus disorder prediction 505 524 - -
Spst6g01066 542 FunFam probable serine/threonine-protein kinase At1g54610 91 186 - -
Spst6g01066 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Spst6g01066 542 SMART serkin_6 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01066 542 MobiDBLite consensus disorder prediction 7 61 - -
Spst6g01066 542 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Spst6g01066 542 FunFam probable serine/threonine-protein kinase At1g54610 187 428 - -
Spst6g01066 542 MobiDBLite consensus disorder prediction 469 542 - -
Spst6g01066 542 MobiDBLite consensus disorder prediction 1 75 - -
Spst6g01066 542 Pfam Protein kinase domain 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01066 Spst-Chr6 9764211 9769138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01066 99 426 Core Cell Cycle Gene Families AT5G10270 51.163 3.23e-115 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Spst6g01066 Pkinase 9.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01066 K08819 - gmx:100779413 1009.98