Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01057 ATGGCGAGACCTTCCAGGCCTCACTCATCTTCCGACGAAGCGCTCTCCAATGCTTCGAGTTCGTCGGAGGAAAAGGAGCGGGTCAACGAACAGATAAACGAAGAGGAAGACGAGGAGGAGCTCGAGGCTGTGGCGCGCTCCGCCAGTTCCGACGACGATGATGATGAAGGTGCAGCTGGAAATCCTCCGGACTCCGACGAAGATCCCGCCGCAGCCGATGACGACCAGGTCAAATTCGCCGCTTACTTTGGTGGGGATAACGTTGATCCTGAAATTAGCAAGCGAGAGAAGGCTAGATTAAAGGAAATGCAGAAAATGAAGAAACAGAAGATCCAGGAGATACTGGATGCACAAAATGCGGCCATAGATGCCGACATGAACAATAGAGGCAAGGGGCGTCTGAAGTATCTCTTGCAGCAGACTGAACTGTTTGCTCATTTTGCAAAAGGTGATCAAACTTCTCCTCAGAAATCTAGGGGAAGTATGGATAGTGAGAGACTCACAAGATTGTAA 513 0.5029 MARPSRPHSSSDEALSNASSSSEEKERVNEQINEEEDEEELEAVARSASSDDDDDEGAAGNPPDSDEDPAAADDDQVKFAAYFGGDNVDPEISKREKARLKEMQKMKKQKIQEILDAQNAAIDADMNNRGKGRLKYLLQQTELFAHFAKGDQTSPQKSRGSMDSERLTRL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01057 170 Coils Coil 15 42 - -
Spst6g01057 170 MobiDBLite consensus disorder prediction 1 77 - -
Spst6g01057 170 MobiDBLite consensus disorder prediction 148 170 - -
Spst6g01057 170 Coils Coil 93 120 - -
Spst6g01057 170 MobiDBLite consensus disorder prediction 54 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01057 Spst-Chr6 9719240 9720263 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01057 K11654 - gmx:100809750 168.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01057 6 9719240 9720263 Spst6g01057 6 9719240 9720263 ECH
Spst3g03081 3 80702546 80711114 Spst6g01057 6 9719240 9720263 PCT