Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01045 ATGCAAGATCGCAATCCTTATAAGATTTTTGTTGTTGTGCAGTCGAAGAGAAAGGTTAGAGAGCCAAAGGAGGAAACCGTGACTCTAGGTCCAGCTGTTAGAGATGGTGAACACGTCTTTGGTGTCGCTCGCATATTTGCCTCCTTCAATGACACCTTCATTCATGTCACTGATTTGTCTGGACGGGAAACTCTGGTCCGAATCACTGGTGGAATGAAGGTTAAAGCTGACAGAGATGAATCATCTCCATATGCTGCTATGCTTGCCGCACAGGATGTTGCTGCCAGATGCAAGGAACTGGGCATAACTGCGCTTCATATTAAGCTTCGTGCAACTGGTGGAAACAAGACCAAAACACCTGGTCCTGGTGCTCAATCAGCTCTTAGGGCCCTTGCTCGTTCAGGAATGAAAATCGGTCGTATAGAGGATGTGACACCCATTCCTTCGGATAGCACCCGTAGAAAGAGTGGTAGAAGAGGTAGAAGACTTTAA 492 0.4675 MQDRNPYKIFVVVQSKRKVREPKEETVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKSGRRGRRL 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01045 163 Gene3D Ribosomal protein S11 14 163 IPR036967 GO:0003735|GO:0005840|GO:0006412
Spst6g01045 163 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 16 156 IPR001971 GO:0003735|GO:0005840|GO:0006412
Spst6g01045 163 ProSitePatterns Ribosomal protein S11 signature. 128 150 IPR018102 -
Spst6g01045 163 Hamap 30S ribosomal protein S11 [rpsK]. 8 160 IPR001971 GO:0003735|GO:0005840|GO:0006412
Spst6g01045 163 Pfam Ribosomal protein S11 41 159 IPR001971 GO:0003735|GO:0005840|GO:0006412
Spst6g01045 163 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 11 160 IPR001971 GO:0003735|GO:0005840|GO:0006412
Spst6g01045 163 FunFam 40S ribosomal protein S14 14 163 - -
Spst6g01045 163 MobiDBLite consensus disorder prediction 143 163 - -
Spst6g01045 163 SUPERFAMILY Translational machinery components 36 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01045 Spst-Chr6 9562115 9563861 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01045 15 152 Cytoplasmic Ribosomal Protein Gene Family AT3G11510 91.304 2.01e-91 261