Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01043 ATGACCCCTCTCTTACCCTCTTTCTCCCTCACCGACCTAGCCTCCTACCTTGTATGCTTCATCCTCCTCCTCATTCTCTTCGAACAGATCTCGTACCTTGTCAAGAAGGGTTCCATCCCAGGACCCTCCTTCGTGGTGCCCTTCCTAGGCAACGCTATTCCATTGGTCCGCAGCCCAACCCTCTTCTGGGACCTTCAAGCCTCTTTGGCCAAGTCTACCCCTTTAGGCTTCTGCGCAAACTACATCCTCGGCAACTTCATCGTCTTCATAAGAGACACCGAACTCTCCCACAAGGTCTTTGCCAATGTCAGACCCAACGCTTTCCACCTGGTGGGTCACCCCTTCGGCAAGAAGCTCTTCGGCGAGCACAACCTCATCTACATGATGGGCCAAGACCACAAGAATCTCCGCCGTCGCATCGCCCCCAACTTCACCCCCAAAGCTCTCTCCACCTATACCGCGCTCCAGCAGATTATCATCCTCGATCACCTCAAGTCCTGGGTCGCCAAAGCACAAGCCCAAACCAATTCCATTCCGCTCCGTATCCTGACCCGTGACATGAACCTCGAGACCTCACAGACTGTCTTCGTGGGCCCCTACTTGGGCCTCAAAGCCCGAGAGCGTTTCGAGAGGGATTACTTTTTATTCAACGTTGGCCTCATGAAGCTTCCGTTTGATTTCCCCGGCACCGCGTTTCGAAACGCGAGGCTCGCAGTGGACCGGCTCGTCGAAACCCTAGCCACCTGCACTGAGATGAGCAAAACCAGGATGAAGAAAGGGGAAGAGCCTTCGTGCTTAATTGATTACTGGATGCAGGAAACGCTAAGGGAAATCGAGGAGACCAAGCTCACCGGAGAGCCGGCCGCGCCGTTCTCCACCGACGCCGAGATCGGTGGTTACCTCTTTGATTTTCTCTTTGCGGCGCAGGACGCGTCGACGTCGTCGCTGCTGTGGGCAGTGGCGCTACTGGACTCACACCCGGAAGTGCTGGCGAAGGTTAGGGCAGAAGTCGCTGGAACCTGGTCGCCGGAGTCGGACGAGTTGATTACTGCAGAGATGCTCCGGGAGATGAAGTACACGCAGGCGGTGGCTCGTGAGGTGGTGAGGCTCCGACCGCCAGCGACGTTGGTGCCGCACATCGCGGCAGAGAGGTTCAAACTGACGGAGTCGTACACAATACCGAAGGGGGCGATCGTGTTCCCGTCGGCGTTCGAGTCGTCGTTTCAGGGGTTCACCGAACCGGAGCGGTTCGACCCGGAGCGGTTTTCAGAAGAGAGACAAGAGGACCAAATATTTAAAAGAAACTTTCTGGCCTTCGGGGCTGGGCCCCACCAGTGTGTGGGTCAAAGGTACGCACTGAATCATCTTGTTCTCTTCATCGCGTTGTTCGCCACGTTGATCGATTTCAAGAGGGATAGAACAGACGGCTGTGATGAGATCGCTTACGTGCCCACCATCTGCCCCAAAGACGATTGCAGGGTTTTTCTCTCCCAACGCTGCACACGGTATCCTTCCTTCCCCGCCGTGGAGGACCTCGTCAAATGA 1545 0.5605 MTPLLPSFSLTDLASYLVCFILLLILFEQISYLVKKGSIPGPSFVVPFLGNAIPLVRSPTLFWDLQASLAKSTPLGFCANYILGNFIVFIRDTELSHKVFANVRPNAFHLVGHPFGKKLFGEHNLIYMMGQDHKNLRRRIAPNFTPKALSTYTALQQIIILDHLKSWVAKAQAQTNSIPLRILTRDMNLETSQTVFVGPYLGLKARERFERDYFLFNVGLMKLPFDFPGTAFRNARLAVDRLVETLATCTEMSKTRMKKGEEPSCLIDYWMQETLREIEETKLTGEPAAPFSTDAEIGGYLFDFLFAAQDASTSSLLWAVALLDSHPEVLAKVRAEVAGTWSPESDELITAEMLREMKYTQAVAREVVRLRPPATLVPHIAAERFKLTESYTIPKGAIVFPSAFESSFQGFTEPERFDPERFSEERQEDQIFKRNFLAFGAGPHQCVGQRYALNHLVLFIALFATLIDFKRDRTDGCDEIAYVPTICPKDDCRVFLSQRCTRYPSFPAVEDLVK 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01043 514 PANTHER CYTOCHROME P450 26 39 463 - -
Spst6g01043 514 PRINTS E-class P450 group IV signature 298 324 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01043 514 PRINTS E-class P450 group IV signature 405 423 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01043 514 PRINTS E-class P450 group IV signature 430 446 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01043 514 PRINTS E-class P450 group IV signature 357 373 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01043 514 PRINTS E-class P450 group IV signature 39 56 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01043 514 PRINTS E-class P450 group IV signature 446 464 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01043 514 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01043 514 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01043 514 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01043 514 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01043 514 FunFam Cytochrome P450 61 29 499 - -
Spst6g01043 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Spst6g01043 514 CDD CYP61_CYP710 76 492 - -
Spst6g01043 514 Gene3D Cytochrome P450 32 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01043 514 Pfam Cytochrome P450 41 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g01043 514 SUPERFAMILY Cytochrome P450 35 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01043 Spst-Chr6 9523700 9525244 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01043 13 506 Cytochrome P450 AT2G34500 67.004 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01043 K09832 - gmx:100808148 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01043 6 9523700 9525244 Spst6g01043 6 9523700 9525244 ECH