Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01035 ATGTCGCTTTCCTGTGCCAAAAACTTCTTCCAGAGGTTCTGGCTAGATGAATTCCAAATGGGAAATATTCCTCATGGAAGCTTTTTGGCCAATGATGATCTCCTGCCATCTCTTGGAGCTAGAATTAACCAGGAAACTAGACTTAGAAAATACGTAATCTCCCCTTTCAACCCTCGCTATAGGGCTTGGGAGTTGTTACTGGTTGTTCTAGTCATATACTCGGCTTGGATATGCCCATTTGAGTTTGCCTTTCTGCCTTACAAGGAAGATGCTCTATTCATCGTAGACAACATTGTCAACGGCTTCTTTGCCATTGACATAGTGTTGACATTCTTTGTTGCATACCTTGATCACCAATCATACCTTCTTGTCGATGATCCAAAGAGGATTGCAATCAAGTACCTATCTACATGGTTTGCTTTTGATGTCTGCTCGACAATACCGTTTCAATCCTTCAGCTTCCTCTTCAACAATCATACCAGTGAGCTTGGCTTCAAAGTTTTTAACATGTTTCGGTTATGGCGGCTGAGACGAGTCAGTTCTCTGTTTGCAAGACTTGAAAAGGACATTCGATTCAATTATTTCTGGACCAGGTGCACAAAGCTCATTGCTGTGACCTTGTTTGCAGTGCACTGTGCGGGATGCTTTAACTATCTCATTGCAGATAGGTACCCAGATTCCAAAAGAACCTGGATTGGTGCAGTGTACCCAAATTTCAAAGAAGAAAGTCTTTGGGACAGATATGTCACCGCAATATACTGGTCCATTGTCACTCTTACTACCACTGGCTATGGGGATTTACATGCCGAGAACACCAGAGAGATGTTGTTTGATATCGCTTACATGTTGTTCAACTTGGGTTTAACATCATATATCATTGGAAACATGACGAATCTTGTAGTCCACTGGACCAGCCGAACCAGAAATTTTAGAGACACAGTCAAAGCAGCTTCTGAATTTGCTTCAAGAAATCATTTGCCCCATCGCATACAGGATCAAATGTTGTCACATATATGTTTGAAGTTCAAAACAGAAGGACTGAAGCAGCAAGAAACATTGAATGAACTTCCAAAGGCAATTCGTTCAAGCATTGCACACCATCTGTTTTTTCCTGTCGTGCAAAAGGTCTACCTTTTCCAAGGAGTCTCTCATGATTTCCTTTTCCAACTGACTTCAGATATGGAGGCTGAATTTTTCCCACCTAAGGAAGATGTGATACTACAAAACGAGTCTTCTACGGAATTTTATGTGCTGGTCTCAGGGGCAGTGGATCTGGTTTGCTACACCGATGGGCATGATCATGTTCATGGTAAGGCAGTTGCAGTAGATGCGTTTGGAGAGATTGGAGTTTTATACCAGATACCACAGCCTTTCACAGTTCGGACCACAGAACTTTCTCAGATTTTAAGACTCAACAAAACATCCTTAATGAATGTTTTACAAGCAAATCCACGAGACGCACAAATTATGATGGATAACCTTTTAATGAGGTTAAAGGGGCGTGGAGATTTTGGCTTTGAGTATCCATGCACAGATTCTGGGCTGTTTCCAAATGAACTGCTTCAAGGAGGTCACACGAGAGGAAGCTTTTCTCACGAATGTACAAATAATTCACATGAGCATTCAGTAATGCATGAAGGAGAGTGCACAGATATTAGAAACTCAGAGACAAGTTTGTGTCAGCTGACTAATGATCATTCAGTAACTAAACATAGGATGATGCCAGAGCATGATACCAGAGAACCTCGTGCCCCCGCACACAAAGGGAATTTAGACATTGTTGAAATTCTGCTTGAAAGAGACGCAAACCCTAACCTAAATTCCATAGGGTGGACACAAAATGCTCTCGCAAAACAGCCCAAAAACAAGGGCATTTGTGCCCAAAAATTGAGTTTAGAAAACGAGAAGTTAGATGAAATTAGAATAGAGATAGCGGAGCCAGAAATCCTCCTTGACAGGGATAGCTCAACGAGAAACAGAAAACATGATGGTATTATATCTACCAAGTTCCCAAAAGAAAAAATAAACACAAAATCCATTTTTAGAAATTCTAACTGTCCAAGTGATAGCAAATCGGCAAGGCTCCCCAAGAAGAGAGTAACAATCCAATTGCTACATGGATGCAGGAGTACCTCACAGGGAAGCCATGGAAAATTAATAATCCTGCCTGATTTATTAGAAGAGCTACTCAAAGTTGCTGGCGAAAAATTTGGCGGCTTCAATCCTACAAAAGTAGTAAATACAGAGAATGCAGAGATAGATGACATAAATGTCATCCGTGATGGAGATCGTCTCTTTCTTCTGTGCAACGATAACGAAATTCGTGTTCATGATGCCTCAGAAGATAGATAG 2352 0.412 MSLSCAKNFFQRFWLDEFQMGNIPHGSFLANDDLLPSLGARINQETRLRKYVISPFNPRYRAWELLLVVLVIYSAWICPFEFAFLPYKEDALFIVDNIVNGFFAIDIVLTFFVAYLDHQSYLLVDDPKRIAIKYLSTWFAFDVCSTIPFQSFSFLFNNHTSELGFKVFNMFRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLIAVTLFAVHCAGCFNYLIADRYPDSKRTWIGAVYPNFKEESLWDRYVTAIYWSIVTLTTTGYGDLHAENTREMLFDIAYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDTVKAASEFASRNHLPHRIQDQMLSHICLKFKTEGLKQQETLNELPKAIRSSIAHHLFFPVVQKVYLFQGVSHDFLFQLTSDMEAEFFPPKEDVILQNESSTEFYVLVSGAVDLVCYTDGHDHVHGKAVAVDAFGEIGVLYQIPQPFTVRTTELSQILRLNKTSLMNVLQANPRDAQIMMDNLLMRLKGRGDFGFEYPCTDSGLFPNELLQGGHTRGSFSHECTNNSHEHSVMHEGECTDIRNSETSLCQLTNDHSVTKHRMMPEHDTREPRAPAHKGNLDIVEILLERDANPNLNSIGWTQNALAKQPKNKGICAQKLSLENEKLDEIRIEIAEPEILLDRDSSTRNRKHDGIISTKFPKEKINTKSIFRNSNCPSDSKSARLPKKRVTIQLLHGCRSTSQGSHGKLIILPDLLEELLKVAGEKFGGFNPTKVVNTENAEIDDINVIRDGDRLFLLCNDNEIRVHDASEDR 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01035 783 ProSiteProfiles cAMP/cGMP binding motif profile. 378 497 IPR000595 -
Spst6g01035 783 ProSiteProfiles KHA domain profile. 699 783 IPR021789 -
Spst6g01035 783 SUPERFAMILY Voltage-gated potassium channels 55 301 - -
Spst6g01035 783 Gene3D Helix hairpin bin 302 368 - -
Spst6g01035 783 CDD CAP_ED 378 491 IPR000595 -
Spst6g01035 783 Pfam Ion transport protein 61 307 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Spst6g01035 783 SUPERFAMILY cAMP-binding domain-like 305 498 IPR018490 -
Spst6g01035 783 PANTHER POTASSIUM CHANNEL AKT1 27 499 IPR045319 GO:0005249|GO:0006813
Spst6g01035 783 Gene3D Jelly Rolls 371 502 IPR014710 -
Spst6g01035 783 PRINTS EAG/ELK/ERG potassium channel family signature 73 80 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst6g01035 783 PRINTS EAG/ELK/ERG potassium channel family signature 274 285 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst6g01035 783 PRINTS EAG/ELK/ERG potassium channel family signature 107 116 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst6g01035 783 PRINTS EAG/ELK/ERG potassium channel family signature 96 106 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst6g01035 783 PRINTS EAG/ELK/ERG potassium channel family signature 292 301 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst6g01035 783 PRINTS EAG/ELK/ERG potassium channel family signature 248 265 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst6g01035 783 FunFam Potassium channel KAT3 62 302 - -
Spst6g01035 783 Pfam KHA, dimerisation domain of potassium ion channel 698 767 IPR021789 -
Spst6g01035 783 Pfam Cyclic nucleotide-binding domain 398 482 IPR000595 -
Spst6g01035 783 FunFam Potassium channel KAT2 366 501 - -
Spst6g01035 783 SMART cnmp_10 378 495 IPR000595 -
Spst6g01035 783 Gene3D - 61 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01035 Spst-Chr6 9457623 9461436 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01035 1 772 Ion Channels AT4G18290 58.333 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01035 K21867 - gmx:100811356 1351.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01035 6 9457623 9461436 Spst6g01035 6 9457623 9461436 ECH