Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01030 ATGGATCCCCTTCAGTATTCCTTCTTCTCTTACCCCTCTTCCTACGGAGAACACAAGTACGCAGTTTCAACCACCCGCTCTACATGCTCCTCCCCTGTTTTTTTCTCAGATTACTGGGATGTTGTGGAGGAGATCAAGAGTGTCTGCGAGACCAATCGGCCTCATTCAGGGGCTCTGCGGTATATGCATGGGAATGCTGATAGTTTCGGCGGGAATATCAGCACCCTTGCCAGGTTTTCTTATTTCGATCATCAAAATGATAATATTGAAGTTCCTTGCGGATTTCTGAAGAATTTTCCAGTCAGTGATTCTGATCGAATTGCGATGGAACAGTGTGATAGTGTGGTTGTGGTTTCAGCAATCTTCAATGATCATGATAAAATCCGCCAACCGAAGGGCCTTGGATCCAACACACTGCAAGAAGTGTGTTTTTTTATGTTCGTAGACGATGTTACCCTCAAAGCTTTTGAACATCATGGATTAATTTCAATGAGTTCAACAGAATACAAGATAGGTGCGTGGAGGATTGTGAAGGTTGCTAAAGAAAATTTGTATGAGAACCCAGCAATGAACGGGGTTATACCTAAGTATTTAGTCCATAGACTATTCCCAAATTCCCAATTCAGCATTTGGGTAGATGCAAAGTTGCAACTGGTGGTTGATCCGTTGTTGTTGATTCATTCACTTGTTATATCTGATGATGTAGACATGGCTATATCAAAGCACCCTTTATATGTTCATACCATGGAAGAAGCAATGGCAACAGCAAGGTGGAAGAAATGGTTGGATGTCAATGCCTTGAAGGAGCAAATGGAAACATACTGTGAAAATGGACTGCAACCATGGACTCCCAAAAAACAGCCCTATACCTCAGATGTACCAGATAGTGCTTTGATATTGAGGAGACATGGACTTGGTAGCAACCTCTTCTCATGCCTTATGTTCAACGAGTTGGAGGCATTTAACCCAAGAGACCAATTGCCCTTTGCATTTGTTAGGGATGTGATGAAGCCCCAGGTGAAGATGAACATGTTTGAGGTGGAAGTTTTTGAGCAGGTGGCAGTGGAGTACAGACACAATCTGAAGAGCAGTGATGGGACCACTCTTAAGAAAGTGTCTTATCAAGGAAGAGCCAAAAGGGCACACCCTGATTTCTCCTATGTTAATGGTAGTTGTTGCAGCAAGTGTCAGAAGTATCTTTGGATGATGTGGGGAGAATCATCAAAAGATTAA 1233 0.4274 MDPLQYSFFSYPSSYGEHKYAVSTTRSTCSSPVFFSDYWDVVEEIKSVCETNRPHSGALRYMHGNADSFGGNISTLARFSYFDHQNDNIEVPCGFLKNFPVSDSDRIAMEQCDSVVVVSAIFNDHDKIRQPKGLGSNTLQEVCFFMFVDDVTLKAFEHHGLISMSSTEYKIGAWRIVKVAKENLYENPAMNGVIPKYLVHRLFPNSQFSIWVDAKLQLVVDPLLLIHSLVISDDVDMAISKHPLYVHTMEEAMATARWKKWLDVNALKEQMETYCENGLQPWTPKKQPYTSDVPDSALILRRHGLGSNLFSCLMFNELEAFNPRDQLPFAFVRDVMKPQVKMNMFEVEVFEQVAVEYRHNLKSSDGTTLKKVSYQGRAKRAHPDFSYVNGSCCSKCQKYLWMMWGESSKD 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01030 410 Pfam Protein of unknown function (DUF616) 65 359 IPR006852 -
Spst6g01030 410 PANTHER ALKALINE CERAMIDASE-RELATED 11 364 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01030 Spst-Chr6 9429719 9432710 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01030 - - vun:114187429 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01030 6 9429719 9432710 Spst6g01030 6 9429719 9432710 ECH
Spst6g01030 6 9429719 9432710 Spst3g01636 3 19666953 19676648 PCT