Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01018 ATGAGGAGAAACTGCAACTTGGAACTTGCCCTCTTCCCTCCCTGCGATTCTGGCCCTCGCCACCACCCCATGGTTGAAGAAGGCAGTGAGATCAGCCCAATGCAAAACTACCTCCATCATCACCACCGCCAGGAACAGCAACAACCACTCACAATATTCTACGATGGCAAGATTTGTGTTGCGGATGTCACAGAGCTTCAGGCCAAATCTATTTTAATGCTTGCAAATAGAAAATTGGAAGAAAGAGTGAGAACAGCAAGTGGGTCAGAGCCATCTTCACCAACAGTCATGCAATCTCCTACTCAGTTGCATAGTCCTGGCACTGCCCTTTCCATGAGAAAATCTCTGCAACGCTTCCTTCAGAAGAGAAAGAACCGGGTCCAAGAAGCATCACCGTACCATCGCTAG 408 0.4853 MRRNCNLELALFPPCDSGPRHHPMVEEGSEISPMQNYLHHHHRQEQQQPLTIFYDGKICVADVTELQAKSILMLANRKLEERVRTASGSEPSSPTVMQSPTQLHSPGTALSMRKSLQRFLQKRKNRVQEASPYHR 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01018 135 MobiDBLite consensus disorder prediction 86 115 - -
Spst6g01018 135 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 29 133 IPR040390 -
Spst6g01018 135 SMART tify_2 43 77 IPR010399 -
Spst6g01018 135 Pfam Jas motif 113 133 IPR018467 -
Spst6g01018 135 ProSiteProfiles Tify domain profile. 43 77 IPR010399 -
Spst6g01018 135 Pfam tify domain 45 76 IPR010399 -
Spst6g01018 135 MobiDBLite consensus disorder prediction 81 135 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01018 1 134 Tify Gene Family AT1G30135 42.336 5.72e-25 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Spst6g01018 tify 3.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01018 - - gmx:100500349 232.261