Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01003 ATGTTAATTGATAATAGTTGTGCTCGTGATTCTGGGATGAGTTCAGAGACTGTCAATTCCACGCAACGTACTTCCATGAGCAACGAGAGCGTTTGCAGCACCAGCTTCAGCCGCCTCTCCTTCGACCTCCCCCCTTCCTCCTCCTCGCCGGATAGCCTCTTCGTCAAGCCTCACCGCTCCTCTGACTTCGCCTACTCCGCCATCTTCCGCCGTCACTCCGCCCTCACCTTCCGCGACTTCCACCTCCTTCGCCGCATCGGCGCCGGCGACATCGGCACCGTATACCTCTGCCGCCTCCGCCACGACGATGACGAGTGCTTCTACGCGATGAAGGTGGTGGACAAGGAGGCGGTGGCACTGAAGAAGAAGGCGCAGAGAGCGGAGATGGAGAGAAAGATTCTGAAAATGGTGGACCACCCCTTCCTCCCTACTCTCTACGCGGAGTTCGAGGCCTCGCATTTCTCTTGCATTGTGATGGAGTATTGCTCCGGTGGCGACTTGCACTCCCTTCGACACAACCACCCTAACAAACGCTTCTCTCTCTCCTCTGCCAGGTTTTACGCGGCTGAAGTACTGGTGGCGTTGGAGTATCTCCACATGCTGGGAATCATCTACAGGGATCTGAAGCCAGAAAACGTGTTGGTCAGATCAGACGGTCACATCATGCTTTCTGATTTCGATCTCTCTCTCTGCTCCCTAGCAATCCCCGCCGTTGAATCCCCTGAGTGTTCGCTGGATCCTGCATTCCCACGCGCGTTACCCTACACCCGCCAGTACTCCACCCCTTTTTCCTGCCTCTCCAACCGCATGTTCCGGTCCAGGAAGGTCCAAACCCTCCAACCGAACCGCCTCTTTGTGGCCGAACCAGTTGGGGCCCGCTCTTGCTCCTTCGTGGGGACACACGAATACGTCTCGCCGGAAGTGGCCTCCGGGAACTCCCACGGCAACGCCGTCGACTGGTGGTCCTTCGGGATATTCATCTACGAGATGGTCTACGGTCGCACACCCTTCGCGGGCCCATCCAACGAGGCTACGCTGCGCAACATCATAAAAAAGCCCCTCGCCTTTCCCACCGCCACGCCCTTTACCACGCTTGAAATGCACGCGCGGGACCTCATCTCCGGGTTGCTCAACAAGGACCCGAACCGCAGACTCGGGTCGAAACGCGGCGCTGCCGACGTCAAGAAGCACCCCTTCTTCGCGGGGCTCAATCTGGCGCTCATACGAATGGTCACGCCGCCGGATGTTCCCTCCCTCAGAAGACAGAAAACAACGCCGTTTTGCCCCGCTAACGATAACGGCAACGTAAATAATAGTAGACATGACCTAACGCCGTTTGACTACTTTTAA 1350 0.5719 MLIDNSCARDSGMSSETVNSTQRTSMSNESVCSTSFSRLSFDLPPSSSSPDSLFVKPHRSSDFAYSAIFRRHSALTFRDFHLLRRIGAGDIGTVYLCRLRHDDDECFYAMKVVDKEAVALKKKAQRAEMERKILKMVDHPFLPTLYAEFEASHFSCIVMEYCSGGDLHSLRHNHPNKRFSLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSLAIPAVESPECSLDPAFPRALPYTRQYSTPFSCLSNRMFRSRKVQTLQPNRLFVAEPVGARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFIYEMVYGRTPFAGPSNEATLRNIIKKPLAFPTATPFTTLEMHARDLISGLLNKDPNRRLGSKRGAADVKKHPFFAGLNLALIRMVTPPDVPSLRRQKTTPFCPANDNGNVNNSRHDLTPFDYF 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01003 449 Pfam Protein kinase domain 80 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01003 449 Pfam Protein kinase domain 295 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01003 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Spst6g01003 449 SUPERFAMILY Protein kinase-like (PK-like) 61 422 IPR011009 -
Spst6g01003 449 MobiDBLite consensus disorder prediction 425 449 - -
Spst6g01003 449 MobiDBLite consensus disorder prediction 1 26 - -
Spst6g01003 449 FunFam protein kinase PINOID 2 78 161 - -
Spst6g01003 449 PANTHER FLIPPASE KINASE 1-RELATED 19 419 - -
Spst6g01003 449 FunFam protein kinase PINOID 162 230 - -
Spst6g01003 449 Gene3D Transferase(Phosphotransferase) domain 1 162 229 - -
Spst6g01003 449 Gene3D Transferase(Phosphotransferase) domain 1 293 418 - -
Spst6g01003 449 MobiDBLite consensus disorder prediction 425 442 - -
Spst6g01003 449 FunFam serine/threonine-protein kinase D6PK-like 292 418 - -
Spst6g01003 449 Gene3D Phosphorylase Kinase; domain 1 78 161 - -
Spst6g01003 449 MobiDBLite consensus disorder prediction 8 26 - -
Spst6g01003 449 SMART serkin_6 80 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01003 449 ProSiteProfiles Protein kinase domain profile. 80 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g01003 449 Coils Coil 110 130 - -
Spst6g01003 449 CDD STKc_phototropin_like 78 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01003 Spst-Chr6 9197740 9199916 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01003 10 449 AGC Kinase Gene Family AT2G34650 65.854 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Spst6g01003 Pkinase 1.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01003 - - gmx:100795536 766.148