Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00986 ATGTTCGTTATTTTTGAAATCGCTGTTAATGCTTGTTCTGTACTTTCTACGCAGCCTAAGCAAATTCACGAGATTAAGGACTTCCTTCTCACTGCCAGAAGGAAGGATGCGAGGTCGGTGAAGATCAAGAGGAGCAGAGATGTGGTTAAGTTCAAGGTCAGATGCTCCAAGTATCTCTACACACTGTGTGTGTTCGACCCAGAGAAAGCTGATAAATTGAAGCAATCACTTCCTCCAGGTTTGAGCGTCCAAGACCTGTAA 261 0.4406 MFVIFEIAVNACSVLSTQPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSLPPGLSVQDL 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00986 86 Gene3D - 18 86 IPR038464 -
Spst6g00986 86 FunFam 60S ribosomal protein L38 18 86 - -
Spst6g00986 86 Pfam Ribosomal L38e protein family 19 85 IPR002675 GO:0003735|GO:0005840|GO:0006412
Spst6g00986 86 PANTHER 60S RIBOSOMAL PROTEIN L38 19 85 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00986 Spst-Chr6 9070362 9070917 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00986 19 86 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 94.118 7.77e-43 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00986 K02923 - mnt:112094472 138.658