Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00983 ATGGAAATGCTCGGACAGAATAGGGAGGGAGAATTCAAAATGACAAGGTTTAGTTCAAGTTGCAGTACTGGTGGTGATTTCGTTTATTATAGGGTTCTACTTTCGTTTCTTCTATTATCCTCACAGTTCTTCTTTCAACTTGCATGGTGTGGTTCCGTTGTAAAGTTCCTTCCTGGATTTGAGGGACCCCTTCCCTTTGTTCTAGAAACCGGGTACGTGGGAGTGGGTGAATCAGAAGATGTGCAGGCATTCTACTACTTCATTGAGTCAGAGAAGAATCCAAAGGAGGATCCTCTCATGCTTTGGCTCACCGGTGGCCCTGGTTGCTCAGCCCTCTCTGGCCTTGTCTTTGAAATAGGTCCACTTGCATTTAAAAATGAGGAGTATAATGGGAGCGTTCCCAAGTTGGTTTTGAGGCCAGACTCATGGACAAAGGTTAGTAGCATTATATTTGTAGACTTGCCTGTTTTCACTGGATTCACTTATCCCACAACAGACTCTGCTGCTCAACGAAGTGACTGGAAACTTGTTCACCAAGTCCATCAATTTCTCAGGAAGTGGTTGATTGATCATCCAAAATTTTTGACAAATGAAGTTTACCTTGGTGGTGATTCATATGCTGGAATTCCTATTCCTGCAGTTGTTCAAGAAATTTCTCAAGGAAATGAAAAAGGGATCCAACCATGGATAAATCTCCACGGATACGTGCTAGGGAATGCATTAACAACTCGAAGAGAAATTAACTATCGAATTCCCTTTTCTTATGGAATGGCACTTATTTCTGACGAATTATACCAGTCATTGCAAGAAAATTGTAAAGGAGAGTACATAAATGTAGACACCAACAATGTATTATGTTCCAGAGATATCAAGTCGTTCAAAGAGGCTACATCAGGACTTGATAAGGCCCATATTTTGGAACCAGCATGTGAGACTTTTGATACTGAAAAATCTCGGAGGAGATCACTGATTAAGAAATATCCCACCAAGAATTCCCTAAATACTCGTCTCCAATTGCCACCCACGAGCTGTCGGAGTTATGCATACTTCCTCTGCGGTTTTTGGGCCAATGATGATAATGTTCGTGCTGCACTGCATATCCGTCAGGGAAGTGTAGGAAAATGGATTCGATGTGAACGCGATATAACTAACAATCAGAATATCCCAAGCAGTTATGATTATCATGTAAATCTCAGCAGATTAGGCTATCGTTCCCTCATATACAGTGGTGATCATGACTATCTGATTCCTTCTTTGGCAACTCAAGCATGGATAAGATCTTTAAACTACTCCATTGTGGATGATTGGAGGCAATGGCATACAAATGGTCAAGTTGCAGGATACACAAGGACTTACTCCAATCGTATGACATTTGCAACTGTGAAGGGTGGAGGGCACACAGCTCCAGAGTACAAGCCTGAAGAATGCCTTGCCATGTACAGTAGATGGCTATCTAACAGGGCTTTGTAG 1470 0.4197 MEMLGQNREGEFKMTRFSSSCSTGGDFVYYRVLLSFLLLSSQFFFQLAWCGSVVKFLPGFEGPLPFVLETGYVGVGESEDVQAFYYFIESEKNPKEDPLMLWLTGGPGCSALSGLVFEIGPLAFKNEEYNGSVPKLVLRPDSWTKVSSIIFVDLPVFTGFTYPTTDSAAQRSDWKLVHQVHQFLRKWLIDHPKFLTNEVYLGGDSYAGIPIPAVVQEISQGNEKGIQPWINLHGYVLGNALTTRREINYRIPFSYGMALISDELYQSLQENCKGEYINVDTNNVLCSRDIKSFKEATSGLDKAHILEPACETFDTEKSRRRSLIKKYPTKNSLNTRLQLPPTSCRSYAYFLCGFWANDDNVRAALHIRQGSVGKWIRCERDITNNQNIPSSYDYHVNLSRLGYRSLIYSGDHDYLIPSLATQAWIRSLNYSIVDDWRQWHTNGQVAGYTRTYSNRMTFATVKGGGHTAPEYKPEECLAMYSRWLSNRAL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00983 489 FunFam Carboxypeptidase 343 488 - -
Spst6g00983 489 Pfam Serine carboxypeptidase 58 486 IPR001563 GO:0004185|GO:0006508
Spst6g00983 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 187 212 IPR001563 GO:0004185|GO:0006508
Spst6g00983 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 151 IPR001563 GO:0004185|GO:0006508
Spst6g00983 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 152 162 IPR001563 GO:0004185|GO:0006508
Spst6g00983 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 456 469 IPR001563 GO:0004185|GO:0006508
Spst6g00983 489 Gene3D alpha/beta hydrolase 63 489 IPR029058 -
Spst6g00983 489 SUPERFAMILY alpha/beta-Hydrolases 54 487 IPR029058 -
Spst6g00983 489 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 53 473 IPR001563 GO:0004185|GO:0006508
Spst6g00983 489 FunFam Serine carboxypeptidase-like 11 48 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00983 Spst-Chr6 9048784 9052176 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00983 48 77 Calmodulin-binding Proteins AT2G22960 73.333 1.55e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00983 K16296 - gmx:100792006 788.875