Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00981 ATGAACCATATGGTCCTCATCCGCACCAACGCCTTCAAAGCATCATTGGTCTGTCGTTTCGAGAAACACGTTTACTTCTTTCAACTTGCATGGTGTGGTTCCGTTGTAAAGTTCCTTCCTGGGTTTGAGGGACCCCTTCCCTTTGTTCTAGAAACCGGGTACGTGGGAGTGGGTGAATCAGAAGATGTGCAGGCATTCTACTACTTCATTGAGTCAGAGAAGAATCCAAAGGAGGATCCTCTCATGCTTTGGCTCACCGGTGGCCCTGGTTGCTCAGCCCTCTCTGGCCTTGTCTTTGAAATAGGTCCACTTGGTTTTAAAAATGAGGAGTATAATGGGAGCCTTCCCAAGTTGGTCTTGAGGCCACACTCATGGACAAAGGTTAGTAGCATTATATTTGTAGACTTGCCTGTTTTCACTGGATTCACTTATCCCACAACAGACTCTGCTGCTCAACGAAGTGACTGGAAACTTGTTCACCAAGTCCATCAATTTCTTAGGAAGTGGCTGATTGATCATCCAAATTTTTTGTCAAACCAAGTTTACATCGGTGGCGATTCATACTCTGGCATTCCTATCCCAGTGATTGTTCAAGAAATTTCACAAGGAAATGAGAAAGGGGTACAGCCATGGATAAATCTCCAGGGATACCTGCTAGGGAATCCAGTTACTACTCAAAGGGAACGTAATTATCAGATCCCCTTTGCACATGGAATGGCACTTATTTCCGATGAACTATACCAGTCATTGCAAGAAAATTGTAAAGGAGAGTACCTAAATGTAGACACCAGAGATGTATTATGTTCCAGAGATGTCAAGTCATTCAAAGAGGCTATATCAGGAATTAATTCGGCCCATATTTTGGAACCATTATGTGAGCCTTTTGATACTGAAAAATCTCGGAGGAGATCACTAATTATGAAATATCCAACCAAGAATTTCCTAAATACTCATCTCAAATTGCCATCCATGAGCTGTCCGACTTATAGGTACTTCCTCTGCGAATTTTGGACCAATGATGATAATGCTCGCAATGCACTCCATATCCGTCAGGGAAGTATAGGAAAATGGAGTCGCTGTACATTCGATATACCTCGCAAGACGGATATCCCAAGCAGTTATGATTATCATGTAAATCTCAGCAGATTAGGCTATCGTTCCCTCATATACAGTGGTGATCATGACTATAAGATTCCTTTTTTGGCAACTCAAGCATGGATACGATCTTTAAACTACTCTATCGTGGATGATTGGAGGCAATGGCATACAAATGGTCAAATTGCAGGATACACAAGGACTTACTCCAATCGGATGACATTTGCAACTGGTGGAGGGCACACAGCTCCAGAGTACAAGCCTGAAGAATGCCTTGCCATGTACAGTAGATGGCTATCTAACAGTGCTCTGTAG 1410 0.4291 MNHMVLIRTNAFKASLVCRFEKHVYFFQLAWCGSVVKFLPGFEGPLPFVLETGYVGVGESEDVQAFYYFIESEKNPKEDPLMLWLTGGPGCSALSGLVFEIGPLGFKNEEYNGSLPKLVLRPHSWTKVSSIIFVDLPVFTGFTYPTTDSAAQRSDWKLVHQVHQFLRKWLIDHPNFLSNQVYIGGDSYSGIPIPVIVQEISQGNEKGVQPWINLQGYLLGNPVTTQRERNYQIPFAHGMALISDELYQSLQENCKGEYLNVDTRDVLCSRDVKSFKEAISGINSAHILEPLCEPFDTEKSRRRSLIMKYPTKNFLNTHLKLPSMSCPTYRYFLCEFWTNDDNARNALHIRQGSIGKWSRCTFDIPRKTDIPSSYDYHVNLSRLGYRSLIYSGDHDYKIPFLATQAWIRSLNYSIVDDWRQWHTNGQIAGYTRTYSNRMTFATGGGHTAPEYKPEECLAMYSRWLSNSAL 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00981 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Spst6g00981 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Spst6g00981 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Spst6g00981 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Spst6g00981 469 FunFam Carboxypeptidase 325 468 - -
Spst6g00981 469 SUPERFAMILY alpha/beta-Hydrolases 36 466 IPR029058 -
Spst6g00981 469 Pfam Serine carboxypeptidase 40 466 IPR001563 GO:0004185|GO:0006508
Spst6g00981 469 Gene3D alpha/beta hydrolase 33 303 IPR029058 -
Spst6g00981 469 Gene3D - 326 468 - -
Spst6g00981 469 FunFam Serine carboxypeptidase-like 11 30 469 - -
Spst6g00981 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 453 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00981 Spst-Chr6 9012817 9020614 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00981 30 59 Calmodulin-binding Proteins AT2G22960 73.333 1.55e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00981 K16296 - gmx:100792006 796.578