Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00973 ATGGTTGTGGAAGATTCCCAAAAATCAACCATCACCGATGACCAAAACCCTAGCAGGGTCGACAACGATGACGATCTCGAAGATGGAGAGATCCTCGACGACGCTGATGACGCTGCTTCGGCCGCCTCCAAGCCTCCAGGCGCTCTCCTCCGTAACCCCCACCCTCTCGAGAATTCCTGGACCTTTTGGTTTGACAATCCTTCTGCCAAAACCAAACAAGCAGCATGGGGCAGTTCCATCCGACCCATCTACACTTTCGCCACCGTCGAAGAGTTTTGGAGCATTTACAATAATATTCATCACCCTAGCAATTTGGGTATCGGGGCCGACTTTCACTGCTTCAAGTATAAGATTGAGCCCAAATGGGAGGACCCTATCTGCACAAATGGTGGAAAATGGACGATGGCCTTCCCTAGGGGAAAATCTGATACCAGTTGGTTGTATACGTTGTTGGCTATGATTGGAGAACAGTTTGATCACGGAGATGAAATTTGTGGAGCTGTTGTGAATGTCAGAAGTAGACAGGATAAAATTTCTATTTGGACTAAGAATGCTTCAAATGAAGCTGCTCAGATGAGCATTGGAAAACAGTGGAAGGAGTTTCTTGATTACAATGAGACAATAGGCTTTATATTTCACGAGGATGCAATGAAGCATGAAAGAAGTGCTAAAACTAAGTATGCCATATGA 690 0.4565 MVVEDSQKSTITDDQNPSRVDNDDDLEDGEILDDADDAASAASKPPGALLRNPHPLENSWTFWFDNPSAKTKQAAWGSSIRPIYTFATVEEFWSIYNNIHHPSNLGIGADFHCFKYKIEPKWEDPICTNGGKWTMAFPRGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRSRQDKISIWTKNASNEAAQMSIGKQWKEFLDYNETIGFIFHEDAMKHERSAKTKYAI 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00973 229 ProSitePatterns Eukaryotic initiation factor 4E signature. 110 133 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Spst6g00973 229 Pfam Eukaryotic initiation factor 4E 55 207 IPR001040 GO:0003723|GO:0003743|GO:0006413
Spst6g00973 229 FunFam Eukaryotic translation initiation factor 4E 47 229 - -
Spst6g00973 229 MobiDBLite consensus disorder prediction 1 52 - -
Spst6g00973 229 Gene3D RNA Cap, Translation Initiation Factor Eif4e 48 229 IPR023398 -
Spst6g00973 229 MobiDBLite consensus disorder prediction 1 16 - -
Spst6g00973 229 SUPERFAMILY eIF4e-like 50 223 IPR023398 -
Spst6g00973 229 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 20 219 IPR001040 GO:0003723|GO:0003743|GO:0006413
Spst6g00973 229 MobiDBLite consensus disorder prediction 20 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00973 Spst-Chr6 8928888 8930670 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00973 1 227 Eukaryotic Initiation Factors Gene Family AT4G18040 62.343 3.76e-109 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00973 K03259 - gmx:100793288 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00973 6 8928888 8930670 Spst6g00973 6 8928888 8930670 ECH