Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00960 ATGGAATCGAAAAACCCTGCGAGATTTACGCTGGGGAAGCAGTCGTCGCTTGCCCCAGAACGCCATAATGAAGGAGAAGAGCCTCAAAACGATGGAGATGCTGTTGATCAAGGTGTGAGGTTAATGTATTCGGCCTTCGAAGGCGATGTGGACGGTATTCGTGAGGTGTTGGAGGCTGGTGTGAGTGTGAATTACAGGGATATTGATGATCGCACTGCTCTTCATGTCGCATCGTGTGAGGGCTTCACTGATGCCGTTGATTTGTTGCTCCAAAAGGGTGCTGAAGTTGACGCTAAAGATCGATGGGGGAGCACGGATGGATTCACTCTGAGCAATCCACTTGCAGATGCTATTTTTTATAAAAAAAATGACGTGATCAAACTATTGGAGAAGCATGGAGCAAAGCCTCTGATGGCCCCTATGCATGTTAATCATGCACGTGAAGTCCCAGAGTATGAAATCAATTCTAAAGAGCTCGATTTTACCAACAGTGTGGAGATAACTAAGGGGACTTTCTGTAGTGCATTGTGGCGTGGAACAGAGGTTGCAGTAAAAAAGCTTGGGGAGGAGGTAATTAATGACGAGGAGAAAGTGAAGGCTTTCAGAGATGAGCTTGCTCTGTTCCAGAAGATCCGGCATCCAAATGTCATTCAATTTCTGGGTGCCGTGACTCAGAGCAGTCCAATGATGATCGTGACAGAATATCTTCCCAAGGGAGATCTTCGTGATTTCTTGAAAAGAAAAGGAGCTTTAAAACCATCAACAGCTGTGAGATTTGCACTTGATATTGCTAGGGGAGTGGGTTATTTGCATGAAAATAAACCATCACCCATTATTCACCGTGATCTTGAACCTTCTAATATATTGCGGGATGATTCTGGGCACCTAAAAGTTGCAGACTTTGGGGTTAGCAAGTTGCTGGCAGTTAAAGAAGACAGGCCTCTAACTTGCCAAGAAACTTCCTGCCGCTATGTGGCTCCCGAAGTTTTCAAACAAGAAGAATATGGCACTAAAGTGGATGTATTTTCATTTGCACTAATTCTACAAGAGATGATTGAAGGCTGCCCTCCTTTTTCTGCAAAGAAAGAAGACGAAGTTCCTAAGGTATATGCTGCCAAAGAGCGTCCACCTTTTCGAGCTCCAGCCAAGCGTTACTCCCATGGAATTAGAGAATTAATTGAGGAGTGCTGGAATGAGAATCCTGCTAAGAGACCAGCATTTAGGCAAATAATAACAAGGCTGGAGTCCATCTACAGCATAATTGGTCAAAAAAGACGTTGGAAGGTTAAGCCATTGAAATGCTTCCAAAATCTGGAAGCCTTGTTGAAGAGAGATCATGCAGATGGAAGTAGTCGCGGTTCATCTCGCTCCACATCCAGCAGAATATGA 1389 0.4449 MESKNPARFTLGKQSSLAPERHNEGEEPQNDGDAVDQGVRLMYSAFEGDVDGIREVLEAGVSVNYRDIDDRTALHVASCEGFTDAVDLLLQKGAEVDAKDRWGSTDGFTLSNPLADAIFYKKNDVIKLLEKHGAKPLMAPMHVNHAREVPEYEINSKELDFTNSVEITKGTFCSALWRGTEVAVKKLGEEVINDEEKVKAFRDELALFQKIRHPNVIQFLGAVTQSSPMMIVTEYLPKGDLRDFLKRKGALKPSTAVRFALDIARGVGYLHENKPSPIIHRDLEPSNILRDDSGHLKVADFGVSKLLAVKEDRPLTCQETSCRYVAPEVFKQEEYGTKVDVFSFALILQEMIEGCPPFSAKKEDEVPKVYAAKERPPFRAPAKRYSHGIRELIEECWNENPAKRPAFRQIITRLESIYSIIGQKRRWKVKPLKCFQNLEALLKRDHADGSSRGSSRSTSSRI 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00960 462 Gene3D - 7 153 IPR036770 -
Spst6g00960 462 Gene3D Transferase(Phosphotransferase) domain 1 237 451 - -
Spst6g00960 462 SUPERFAMILY Protein kinase-like (PK-like) 162 415 IPR011009 -
Spst6g00960 462 Gene3D Phosphorylase Kinase; domain 1 154 236 - -
Spst6g00960 462 PIRSF ILK 1 437 - -
Spst6g00960 462 FunFam Integrin-linked protein kinase family 20 152 - -
Spst6g00960 462 CDD STKc_MAP3K-like 167 414 - -
Spst6g00960 462 ProSiteProfiles Ankyrin repeat region circular profile. 69 101 - -
Spst6g00960 462 SMART ANK_2a 109 138 IPR002110 GO:0005515
Spst6g00960 462 SMART ANK_2a 36 65 IPR002110 GO:0005515
Spst6g00960 462 SMART ANK_2a 69 98 IPR002110 GO:0005515
Spst6g00960 462 PRINTS Tyrosine kinase catalytic domain signature 272 290 IPR001245 GO:0004672|GO:0006468
Spst6g00960 462 PRINTS Tyrosine kinase catalytic domain signature 385 407 IPR001245 GO:0004672|GO:0006468
Spst6g00960 462 PRINTS Tyrosine kinase catalytic domain signature 233 246 IPR001245 GO:0004672|GO:0006468
Spst6g00960 462 SUPERFAMILY Ankyrin repeat 40 138 IPR036770 -
Spst6g00960 462 FunFam Os01g0748600 protein 147 434 - -
Spst6g00960 462 MobiDBLite consensus disorder prediction 1 34 - -
Spst6g00960 462 Pfam Protein tyrosine and serine/threonine kinase 175 414 IPR001245 GO:0004672|GO:0006468
Spst6g00960 462 Coils Coil 184 204 - -
Spst6g00960 462 ProSiteProfiles Protein kinase domain profile. 126 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00960 462 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 144 423 - -
Spst6g00960 462 ProSiteProfiles Ankyrin repeat profile. 69 101 IPR002110 GO:0005515
Spst6g00960 462 FunFam serine/threonine-protein kinase STY46-like 154 237 - -
Spst6g00960 462 Pfam Ankyrin repeats (3 copies) 41 136 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00960 Spst-Chr6 8757941 8765542 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00960 8 435 MAP Kinase Kinase Kinase AT4G18950 67.206 0.0 599
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Spst6g00960 PK_Tyr_Ser-Thr 5.4e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00960 - - gmx:100790126 825.469