Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00951 ATGGGAATTTCCAATTTCCTTGTCTTCCTTTCGATTGCTCTAAGTTGCTTCCAGTTGCTGAGAGTCTCTGCATCAAAAGTACCCCAAGAAGAAGTTGATGCTCTTAGAGAAATTGCGAGTGCGATGGGTTCGGCATATTGGAAGTTTGATGCTGATTCCTGCAATATTGAAATGGTTGGACTAACGCATGAACCGCCAGATGAATCAGAGAGAAGCATTCGTTGTGACTGCAGTTTTGAAAACAATACTGTCTGTCATGTTGTGAGGATGATTCTCAAGCGCCTTAGTCTACCTGGCACACTCCCACCTCAACTGGCCAAGCTACCTTTTCTCCGAGAAGTAGATTTTGCTTACAATTGCTTCACCGGTTCGATTCCAGAGGAATGGGCTTCGATGAAATTAGCTTCAATTTCTCTTCTTGTGAATCGCTTATCTGGGGAAATTCCAAAGCATCTAGGAAATATTACTACTCTCACATACCTGATGCTTGAAGCAAACCAATTTTCTGGTGCTGTTCCACCTGAGCTTGGGAAACTAATCAACTTGCAGACCTTGGTTCTGTCATCCAATCAATTGACTGGGAACTTACCTCTTACACTTGCTGGACTACAAAATTTGACTGACTTTGATCTATCGTACAACAACTTTACTTGGCAAGACGATGAGCAACCTGCTTGTCAGGATGGCATAGAGGAGTACGTTCCTTGCTCCAAGAATTTCAGCTGTTCACGGTTTTCAAGTTGTTTACATGTTAACTGTGGTGGGAAGGATGTAAAAATAAAAGATGATAAAGGAGAAACCCTTTATGTGGGAGATGAAGATGTTCAGGGTGGCACTGCAACTTATTTCTATAGTAATGATCACTGGGGATTTAGTAGCACTGGAGACTTCATGGATGATTTTGAGGCGCAGAACATACGTTACACTGTTTCTCTGCCATCTTCAAATATGCCAGAACTATATAAAACAGCGCGTGTATCTCCAATTACACTTACTTATTTCCATAACTGCATGCAAAATGGGAACTATACAGTAAACCTTCACTTTGCTGAGATACAGTTTACGAATGATAAAACATATAAAAGTCTTGGGAAGCGCATATTTGATGTCTATGTTCAGGGAAGACTGACTCGCAAAAATTTTAATATAGAGAGTGAGACAAATGATACTGAAAAACCACTGGTACTGCCTATATACAATATCAGCATCACAAATAATGTCTTGGAGATTAGATTCTACTGGGCTGGAAAAGGAACGACAAGAATTCCTGATGCTGGAGTTTATGGTCCCCTTGTATCAGCTATATCTGTGGTTTCAGATTCTAGAATTTGCTCAAATGGGAAAAAGAAGGTTGTTGTTTCGATAATCATAGCCAGTGTAGCCGGTGCTCTATGCTTAGTGTCATTTATATCTGGATTCATTTGGTGGAAGTGGAAACGGTTTTTCGGAGGGAAACTGAAAAAGAAAGAAGGTGCAAAAGATGGTGATATTCAGGCAGGTAATTTTAGCCTGGAGCATATCAGAGCTGCCACTAATGACTTCTCGTCTGCTAATAAGATTGGAGAAGGCGGTTTTGGTCCTGTATACAAGGTTTCTGCTAACCTGGATGCAACAATGCAGGGTCAATTGCTAGATGGTACTTTTATAGCGGTCAAGCAATTGTCATCAAAATCACGGCAGGGAAATCGTGAATTTATAAATGAAATAGGCTTGATATCTTGTGTGCAACACCCCAACCTTGTAAAGCTTCATGGATACTGTGCTGAAGGGGAACAGCTTTTATTGGTTTATGAGTACATGGAAAATAACAGCCTTGCCCGAGCTTTATTTGGTAGTGAGAACCATCAGCTTAAATTGGATTGGTCTACAAGGTTTAGGATTTGCATTGGCATAGCTAAAGGGCTAGCATTTCTCCATGATGAGTCAAGATTCAAGATAGTGCACAGAGATATCAAGGCTTCTAATGTGTTACTCGATCGTGATTTGAATCCAAAAATATCTGACTTCGGCTTGGCTAAGCTTGATGAAGCAGAGAAGACCCATATCAGCACCCGGGTTGCTGGGACCATAGGATATATGGCACCAGAATATGCATTATGGGGCTATCTTACGTATAAGGCTGATGTTTACAGTTTTGGAGTTGTGGCATTAGAAATTATTAGTGGGAAAAGCAATAACAATCATTTACCAGACGATGGAAGTGCTTGTCTTTTGGATTGGGCATGTCAGTTAAACCAAGCTAAGAACTTATTGGGGTTGGTTGATGAAAGGTTGGGGCCAGACCTTAATGAAACGGAAGTAGAAAAGGTAGTCAGAATAGCTCTCCTGTGCACAAATGCTTCTCTATCACTTAGGCCTACAATGTCTGAGGTGGTGAATATGCTTGAAGGACAATTAGATATTCCAGATGCAATCCCAGAACCAAGTACCTACAGTGAGGATTTAAGGTTCAAAGCCTTAAGGGACCTCCAGCAACATCGATCAAAGCAGAGTTTGAGTCCAAACCAGAGCCAGAATTCATCGACTCATATATTCAGCTCAGCATCTCCTGGTAATACTCACATTACGGAGTAA 2574 0.4106 MGISNFLVFLSIALSCFQLLRVSASKVPQEEVDALREIASAMGSAYWKFDADSCNIEMVGLTHEPPDESERSIRCDCSFENNTVCHVVRMILKRLSLPGTLPPQLAKLPFLREVDFAYNCFTGSIPEEWASMKLASISLLVNRLSGEIPKHLGNITTLTYLMLEANQFSGAVPPELGKLINLQTLVLSSNQLTGNLPLTLAGLQNLTDFDLSYNNFTWQDDEQPACQDGIEEYVPCSKNFSCSRFSSCLHVNCGGKDVKIKDDKGETLYVGDEDVQGGTATYFYSNDHWGFSSTGDFMDDFEAQNIRYTVSLPSSNMPELYKTARVSPITLTYFHNCMQNGNYTVNLHFAEIQFTNDKTYKSLGKRIFDVYVQGRLTRKNFNIESETNDTEKPLVLPIYNISITNNVLEIRFYWAGKGTTRIPDAGVYGPLVSAISVVSDSRICSNGKKKVVVSIIIASVAGALCLVSFISGFIWWKWKRFFGGKLKKKEGAKDGDIQAGNFSLEHIRAATNDFSSANKIGEGGFGPVYKVSANLDATMQGQLLDGTFIAVKQLSSKSRQGNREFINEIGLISCVQHPNLVKLHGYCAEGEQLLLVYEYMENNSLARALFGSENHQLKLDWSTRFRICIGIAKGLAFLHDESRFKIVHRDIKASNVLLDRDLNPKISDFGLAKLDEAEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIISGKSNNNHLPDDGSACLLDWACQLNQAKNLLGLVDERLGPDLNETEVEKVVRIALLCTNASLSLRPTMSEVVNMLEGQLDIPDAIPEPSTYSEDLRFKALRDLQQHRSKQSLSPNQSQNSSTHIFSSASPGNTHITE 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00951 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Spst6g00951 857 Gene3D Ribonuclease Inhibitor 28 249 IPR032675 -
Spst6g00951 857 Pfam Leucine rich repeat 157 216 IPR001611 GO:0005515
Spst6g00951 857 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 209 836 - -
Spst6g00951 857 ProSiteProfiles Protein kinase domain profile. 514 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00951 857 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 484 599 - -
Spst6g00951 857 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 33 196 - -
Spst6g00951 857 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 246 440 - -
Spst6g00951 857 FunFam Putative LRR receptor-like serine/threonine-protein kinase 600 807 - -
Spst6g00951 857 Pfam Protein tyrosine and serine/threonine kinase 517 795 IPR001245 GO:0004672|GO:0006468
Spst6g00951 857 Pfam Malectin domain 248 435 IPR021720 -
Spst6g00951 857 MobiDBLite consensus disorder prediction 823 857 - -
Spst6g00951 857 Gene3D Phosphorylase Kinase; domain 1 484 599 - -
Spst6g00951 857 SUPERFAMILY L domain-like 81 219 - -
Spst6g00951 857 SUPERFAMILY Protein kinase-like (PK-like) 499 825 IPR011009 -
Spst6g00951 857 MobiDBLite consensus disorder prediction 826 857 - -
Spst6g00951 857 Gene3D - 250 442 - -
Spst6g00951 857 SMART serkin_6 514 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00951 857 CDD STKc_IRAK 520 797 - -
Spst6g00951 857 Gene3D Transferase(Phosphotransferase) domain 1 600 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00951 Spst-Chr6 8672831 8683900 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00951 99 842 Receptor kinase-like Gene Family AT1G53430 44.286 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst6g00951 PK_Tyr_Ser-Thr 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00951 - - qsa:O6P43_032037 917.146