Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00936 ATGTTATGCCACTACGCAACATTACCTTCCACTTCAGTTCTCATTCTTCTATTCTATCTTCTACAAAATACTACAAACCTTAACCAAATCAAAGGGAAGAGACTCATCATCACCTTTCTAAAACAAATGATGAAATGGGGAGCAAGAAAACATTCTTCAGCTTCCTCTTCTTCTTCTCCTGGCTCTTCTTTCGTTTCCCATGCATCTCCTTTCTCTTGGCTCTCCATGTTCAAGAATATGAGAATCAATTCAGACCCAAGTGCTGCAAAAATGAAGCACAAGGCAAAGCCGAGTGGTTCACCACAATATTTTTGTGAGACTGGAGATACATGTTGTGTAAAGGATGATGGTGATTTATGTAGACAGCCTTTAGATGAAGAGAGTGGTGATGATAAGAAGAATGAAGATATTGATGAGAGTGACTTTCCCTTCTCAAGTTGCCTTGGTGGTAGAAGGGATGCTAAGAAACATGGAAAGAAAGCCACACTCAAGTTAAAGGCGAGGGATATTGGTCAAGCAGAAGAAAGAAAGTTGTTGAATGATGGGAAGCCTTCAAAGGAGATGGATGAGTACAATAGAGGAAAGGAATATGAAAACTTAAGGAAGAGATTTGAAAGGAAAGCACAAGAGGCTTTTCAAGAGCAACTCCTCACATTAGAAACAGAAATTGAGGAAGTTGAGTTTGGATCCAGTAAAGCAGTGGAAAAAGATGCGTTACAGTTTGAATCACCCAGAACAATTTGCACCCCAAGAACACGTGCTTTTTCCTCTTCAGCAGGTTCAAGGAATCCTATCCTTGGGAATATTATAGAAAAATTTGAGAAAACTGAAAGGCTATCTCACAAGAAAATGAGTTCTGAGAAGAAGAACTTGAAACAAACTGAAGATATGAAGGTAAAGACTAACAGCAAGAAGCAACCACATCATCTCAGCAGAGAACATCAGAGGAGGAAACCAAAGCAGAGCTCTAGGGTCAAAATACATTCTCCAAGGATGGTTGCTAAGGTTGAAATTTGCAAAATAAAGGCTCTGGAAGACATGAAGAAAGCAAAACTAAAGATGAAGAAAGAAATGGAGGAAATTGTGGAGGAAATACCAGGATTAGAGAGCTTTGCTGTGATTAAGTCTTCAATAGATCCAAAGCAAGATTTTAGAGATTCAATGATTGAGATGATCATGGAAAATCAGATTATTGAGCCAGAAGAAATGGAAGATCTTTTGGCATGTTATCTGACATTGAATGCAGATGAGTATCATGATCTCATCATCAAAGTGTTCAGGCAGGTATGGTTTGACATGAGCCAAGGTAGTTTGAGTATTAAACTAAATATGCAATGTTGTTACTATGAATAA 1353 0.3829 MLCHYATLPSTSVLILLFYLLQNTTNLNQIKGKRLIITFLKQMMKWGARKHSSASSSSSPGSSFVSHASPFSWLSMFKNMRINSDPSAAKMKHKAKPSGSPQYFCETGDTCCVKDDGDLCRQPLDEESGDDKKNEDIDESDFPFSSCLGGRRDAKKHGKKATLKLKARDIGQAEERKLLNDGKPSKEMDEYNRGKEYENLRKRFERKAQEAFQEQLLTLETEIEEVEFGSSKAVEKDALQFESPRTICTPRTRAFSSSAGSRNPILGNIIEKFEKTERLSHKKMSSEKKNLKQTEDMKVKTNSKKQPHHLSREHQRRKPKQSSRVKIHSPRMVAKVEICKIKALEDMKKAKLKMKKEMEEIVEEIPGLESFAVIKSSIDPKQDFRDSMIEMIMENQIIEPEEMEDLLACYLTLNADEYHDLIIKVFRQVWFDMSQGSLSIKLNMQCCYYE 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00936 450 MobiDBLite consensus disorder prediction 276 308 - -
Spst6g00936 450 NCBIfam uncharacterized plant-specific domain TIGR01568 371 433 IPR006458 -
Spst6g00936 450 MobiDBLite consensus disorder prediction 174 193 - -
Spst6g00936 450 Pfam Transcriptional repressor, ovate 377 433 IPR006458 -
Spst6g00936 450 Coils Coil 194 214 - -
Spst6g00936 450 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 252 434 IPR038933 GO:0045892
Spst6g00936 450 MobiDBLite consensus disorder prediction 309 325 - -
Spst6g00936 450 MobiDBLite consensus disorder prediction 276 327 - -
Spst6g00936 450 Coils Coil 340 364 - -
Spst6g00936 450 ProSiteProfiles OVATE domain profile. 373 432 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00936 Spst-Chr6 8577386 8578738 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Spst6g00936 Ovate 9.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00936 - - gmx:102666239 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00936 6 8577386 8578738 Spst6g00936 6 8577386 8578738 ECH