Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00902 ATGGCTGAGGATAAGGAGATGTCTACCTCTGTCATCAATGGCAATGATTCCCTCACTGGTCATATCATATCTACAACTATTGGAGGCAAAAATGGGGAGCCCAAACAGACTATTAGCTACATGGCAGAACGGGTCGTTGGAACTGGCTCATTCGGAATTGTTTTCCAGGCAAAATGCTTGGAAACTGGGGAAGCAGTGGCCATCAAAAAAGTTTTACAGGACAGAAGATACAAGAACCGTGAACTACAGTTAATGCGTGTTTTGGATCATCCAAATGTGATCTCACTGAAGCATTGTTTCTTTTCCACTACAAGTACAGATGAGCTTTTTCTTAATTTGGTGATGGAATATGTTCCAGAGTCCATGTATAGAGTCTTAAAGCACTATAGCAATGCTAATCAAAGAATGCCAATCATCTACGTGAAACTTTATATGTACCAGATTTTTAGGGGTTTGGCTTATATCCACACTGTTCCCAAAGTTTGCCACAGGGACTTGAAGCCTCAAAATATTCTGGTGGATCCTCTCACACACCAAGTGAAGCTATGTGATTTTGGAAGTGCCAAAGTTCTAGTCAAAGGTGAAGCTAATATATCATACATATGCTCACGATTCTATCGGGCTCCAGAACTTATATTTGGTGCCACAGAGTATACAACTTCAATTGATATTTGGTCAGCTGGCTGTGTCCTTGCTGAACTTCTTTTGGGCCAGCCATTATTCCCAGGAGAAAATGCAGTAGACCAGCTTGTACATATTATAAAGGTGCTTGGCACACCAACACGAGAGGAAGTACGCTGTATGAATCCCAATTACAATGACTTTAGATTTCCACAGATAAAAGCACACCCATGGCACAAGATATTCCACAAAAAGATGCCTCCAGAAGCTATTGATCTTGCATCTCGGCTTTTGCAATACTCCCCAAGTCTCCGGTGCACTGCGCTTGAAGCATGTGCACATCCTTTCTTTGATGAACTTCGAGAACCCAATGCTCGCCTGCCAAATGGTCGTCCATTTCCTCCTCTATTTAACTTTAAACAGGAATTAACCGGAGCATCTCCAGAGCTTATTAACAAGTTGATACCTGACCACGTGAAGCGGCAAATAGGGATACAATTTGTTCATCCAACGGGAACATGA 1143 0.4217 MAEDKEMSTSVINGNDSLTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRVLDHPNVISLKHCFFSTTSTDELFLNLVMEYVPESMYRVLKHYSNANQRMPIIYVKLYMYQIFRGLAYIHTVPKVCHRDLKPQNILVDPLTHQVKLCDFGSAKVLVKGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVHIIKVLGTPTREEVRCMNPNYNDFRFPQIKAHPWHKIFHKKMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLFNFKQELTGASPELINKLIPDHVKRQIGIQFVHPTGT 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00902 380 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Spst6g00902 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Spst6g00902 380 CDD STKc_GSK3 35 327 IPR039192 -
Spst6g00902 380 SUPERFAMILY Protein kinase-like (PK-like) 39 348 IPR011009 -
Spst6g00902 380 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 5 369 - -
Spst6g00902 380 FunFam Glycogen synthase kinase-3 beta 24 119 - -
Spst6g00902 380 Gene3D Phosphorylase Kinase; domain 1 25 119 - -
Spst6g00902 380 ProSiteProfiles Protein kinase domain profile. 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00902 380 SMART serkin_6 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00902 380 Pfam Protein kinase domain 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00902 380 FunFam Shaggy-related protein kinase kappa 120 367 - -
Spst6g00902 380 Gene3D Transferase(Phosphotransferase) domain 1 120 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00902 Spst-Chr6 8300062 8303997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00902 44 362 MAP Kinase Gene Family AT3G59790 35.329 3.41e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Spst6g00902 Pkinase 6.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00902 K14502 - gmx:100779909 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01763 3 23701840 23706439 Spst6g00902 6 8300062 8303997 PCT