Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst6g00900 | ATGAAGCTCTTTCCCACTTTCTTCATTCTCCTTTTGCTGGTTGTTCTCGTGGAATCTAAATATTCATGCAAAAATGAAGACCAGGAGCTGGTGTCAAAGGCGTTTCAATCTGTGTCTGGATTCTACTCTTCCTGGTTCCAAAGCGGTTCTAATTGTTCAAATGCTGATACTATTAAAGGGCTAAATTTTTCGTCCAAAAACCTAAGTGGAAGCATATCGTGGAAGTATCTGCGGAACATGTCCAAGTTGGAGGTTCTAGATTTGTCTGGGAATTTTCTACAAGGGCAGGTACCAAACTGGTTGTGGACAAGCTCAACCTTATTGGTAGTGAATCTTTCCAACAACAGGTTCGGAGGGAGCATTAACCCCACTACCCAAAATGGTTCCTTTTCATCTCTGCAAAGTCTCAATCTCTCACACAACAGGTTCACCAACCAGCTTCACCTCTCTGGTTTTTCAAATCTTAAAAGCATCGACCTTTCGCACAACAACCTCAGAACTTTACCTTCGGGGTTCCAAAACCTCACCAATCTCCACCACCTCAATCTCTCCAACTGCAACATCAAAGGAAGCGTAAAGTCCATTTCTTCCCTAACCTCACTATCCTTCTTGGACCTTTCAAACAACTCTTTAAACGGTAGCTTCCCCTCCGATTTCCCTCCCCTGAATACCATCAAATTCTTGAACATCTCCCACAACAACTTCAAAGCATCGACCACCTTAGACAGGTTCAAAAAGTTCGGGAAATCAGCGTTCATTCACGCTGGCAACAACTTCAGCTACAACGTATCCAAAACGCCAAAGCTAGGTTCATCTTCAACCCCACCACATGAACAGGCCCACCACATTCACGCGGAGAAGAAGAGGCGGAAGGTAAAACAAAAGTCAAAACAGAAAACGAGAAGCATGATTGCCGCCCTGTCATGTGCCTCCGCACTCTTGGTTGTCGGGTTGTGCATGTGCGTGGTGTGGCGTTGCAGAAGGAAGAGTCAATTGGCGAAAAGGAACAAGTGGGCGATCTCGAAGCCGGTCCCAGTGAGCATGAAGATGGAGAAATCGGGACCGTTCGCGTTCGAGACAGAGTCAGGGACATCCTGGGTGGCTGACCTGAAAGAACCCTCTTCCGCACCCGTCGTCATGTTCGAGAAGCCCCTCATGAACCTCACCTTCGTGGACCTCATCGCCGCCACGTCACACTTCGGCAAAGACTCTCTCCTGGCTGAGGGCAGGTGTGGGCCCGTGTACCACGCTGTCTTAACGGGAGACATCCACGTGGCAATCAAACTCCTCGAAAACGCCAGAGACGTCGTTCATGATGACGCTGTCGCTCTCTTCGTTGACCTTTCCCAACTCAAACACCCCAATCTCTTACCCCTCTCCGGTTACTGTATTGCAGGGAAGGAGAAGCTGGTGTTGTACGAGTTTATGTCGAACGGGGATTTGGGTAGGTGGTTGCAGGAGCTACCAGCGGGGGAGACTAACGTGGAGGATTGGAGTGGTGACACGTGGGACATTATTCAAAATGGCGCCGTTTCTCGAGCCTCGCCCCCGGAAAAGATGGGCTGGCCAACACGCCACCGTATCGCGGTGGGCGTGGCGCGTGGATTGGCGTTTCTGCACCACGCGGGCTCCAGGCCTGTCGTGCACGGTCATTTCGTCACCTCCAACGTGCTTCTCGGCGACGACTTCGAGCCGCGAATCGCGGATTTCGGTTTCCGGAAGTTCGGGAGGGAGAACAACGCCGCGGCGGCGGCGAATTGTTCGACGGAGACGGATGTTTACTGCTTCGGTGTGGTGCTGATGGAGCTTCTGACGGGGAGGAGCGGCACGGCGGAGACGGTGGTTTGGGTGAGGAAGGCAGTGAGGGAGGGACACGCGGTGAGGGCGTTGGATGAGAGGCTCAAACTCGGCGGCGGCGACTCGGAGAGTGAGATGGTGGAGAGCCTCCGAGTGGCGTATTTGTGTACGGCCGAGTCGCAGGCGAAGAGGCCCACCATGCAGCAGGTGTTGGGCCTGCTCAAAGATATTCACCCGAGCCACGGACTCGAGTGA | 2052 | 0.5239 | MKLFPTFFILLLLVVLVESKYSCKNEDQELVSKAFQSVSGFYSSWFQSGSNCSNADTIKGLNFSSKNLSGSISWKYLRNMSKLEVLDLSGNFLQGQVPNWLWTSSTLLVVNLSNNRFGGSINPTTQNGSFSSLQSLNLSHNRFTNQLHLSGFSNLKSIDLSHNNLRTLPSGFQNLTNLHHLNLSNCNIKGSVKSISSLTSLSFLDLSNNSLNGSFPSDFPPLNTIKFLNISHNNFKASTTLDRFKKFGKSAFIHAGNNFSYNVSKTPKLGSSSTPPHEQAHHIHAEKKRRKVKQKSKQKTRSMIAALSCASALLVVGLCMCVVWRCRRKSQLAKRNKWAISKPVPVSMKMEKSGPFAFETESGTSWVADLKEPSSAPVVMFEKPLMNLTFVDLIAATSHFGKDSLLAEGRCGPVYHAVLTGDIHVAIKLLENARDVVHDDAVALFVDLSQLKHPNLLPLSGYCIAGKEKLVLYEFMSNGDLGRWLQELPAGETNVEDWSGDTWDIIQNGAVSRASPPEKMGWPTRHRIAVGVARGLAFLHHAGSRPVVHGHFVTSNVLLGDDFEPRIADFGFRKFGRENNAAAAANCSTETDVYCFGVVLMELLTGRSGTAETVVWVRKAVREGHAVRALDERLKLGGGDSESEMVESLRVAYLCTAESQAKRPTMQQVLGLLKDIHPSHGLE | 683 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst6g00900 | 683 | ProSiteProfiles | Leucine-rich repeat profile. | 154 | 176 | IPR001611 | GO:0005515 | |
Spst6g00900 | 683 | PRINTS | Leucine-rich repeat signature | 198 | 211 | - | - | |
Spst6g00900 | 683 | PRINTS | Leucine-rich repeat signature | 155 | 168 | - | - | |
Spst6g00900 | 683 | ProSiteProfiles | Leucine-rich repeat profile. | 177 | 199 | IPR001611 | GO:0005515 | |
Spst6g00900 | 683 | MobiDBLite | consensus disorder prediction | 267 | 297 | - | - | |
Spst6g00900 | 683 | Gene3D | Ribonuclease Inhibitor | 125 | 309 | IPR032675 | - | |
Spst6g00900 | 683 | Gene3D | Ribonuclease Inhibitor | 15 | 124 | IPR032675 | - | |
Spst6g00900 | 683 | SUPERFAMILY | L domain-like | 53 | 238 | - | - | |
Spst6g00900 | 683 | SUPERFAMILY | Protein kinase-like (PK-like) | 377 | 673 | IPR011009 | - | |
Spst6g00900 | 683 | Gene3D | Transferase(Phosphotransferase) domain 1 | 504 | 681 | - | - | |
Spst6g00900 | 683 | MobiDBLite | consensus disorder prediction | 283 | 297 | - | - | |
Spst6g00900 | 683 | Pfam | Leucine rich repeat | 132 | 188 | IPR001611 | GO:0005515 | |
Spst6g00900 | 683 | Pfam | Protein tyrosine and serine/threonine kinase | 404 | 670 | IPR001245 | GO:0004672|GO:0006468 | |
Spst6g00900 | 683 | Gene3D | Phosphorylase Kinase; domain 1 | 360 | 475 | - | - | |
Spst6g00900 | 683 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 50 | 676 | - | - | |
Spst6g00900 | 683 | ProSiteProfiles | Protein kinase domain profile. | 400 | 680 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst6g00900 | 683 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 361 | 475 | - | - | |
Spst6g00900 | 683 | Pfam | Leucine Rich Repeat | 82 | 100 | IPR001611 | GO:0005515 | |
Spst6g00900 | 683 | SMART | LRR_typ_2 | 80 | 104 | IPR003591 | - | |
Spst6g00900 | 683 | SMART | LRR_typ_2 | 198 | 221 | IPR003591 | - | |
Spst6g00900 | 683 | SMART | LRR_typ_2 | 152 | 174 | IPR003591 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst6g00900 | Spst-Chr6 | 8284381 | 8286712 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst6g00900 | 61 | 676 | Receptor kinase-like Gene Family | AT5G07280 | 31.250 | 7.52e-72 | 251 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VII-2 | Spst6g00900 | PK_Tyr_Ser-Thr | 3.5e-22 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst6g00900 | - | - | gmx:100778920 | 1141.33 |