Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00899 ATGGCCGACATCGCTTCGAAGACCCCTCCCGGTACCTCCCCAATGAACCACCACAAGAAGGAGCCATCGAACCTTCTGTTGGGTCGTTTTGAGATTGGGAAGCTCCTTGGTCATGGAACCTTCGCGAAGGTCTACTACGCGCGGAACCTGAAAACTGGCGAAGGCGTGGCCATCAAGGTAATCGACAAGGAGAAGATTCTGAAGGGAGGTTTGGTGGCGCACATCAAGCGCGAGATCTCCATTCTCCGTCGCGTGCGCCACCCCAACATCGTGCAACTCTTCGAAGTAATGGCCACCAAGAGCAAGATCTATTTCGTAATGGAATACGTTCGCGGGGGCGAGCTTTTCAACAAGGTCGCAAAAGGGAGGCTCAAGGAAGAGGTTGCGAGGAAATACTTTCAGCAGTTAATCTCCGCAGTAGGGTTCTGCCACGCCAGAGGGGTGTACCATAGAGATCTCAAACCTGAAAATCTCTTGCTTGATGAGCATGGTAATCTCAAGGTGTCTGATTTCGGGCTGAGTGCGGTTTCTGATCAAATACGACAGGATGGGTTGTTCCACACTTTTTGTGGGACACCTGCTTATGTTGCTCCAGAGGTTCTGGCGAGGAAAGGGTACGACGGTGCCAAGGTGGATCTCTGGTCTTGTGGGGTTGTGTTGTTTGTGTTGATGGCGGGGTATCTACCCTTTCACGACCAGAATGTTATGGCAATGTACAAGAAGATTTACAGAGGGGAGTTTCGGTGTCCCAGGTGGTTTTCTCCTGATTTGTCCAGGCTTCTCACGAGGCTTCTTGATACTAAACCTGAAACCCGGATTGCGATTCCCGAGATTATGGAGAACAAGTGGTTCAAAAAAGGGTTCAAGCAGATCAAGTTTTATGTTGAGGATGATAGGCTTTGCAATGTGGATGATGATGTGCTTTTGGACAATGACGATGATACAGCTTCCATTGTTTCTACTGCTTCTTTTTCGGATTACTCGGTCTCGGAGTCTGATTCTGAGGTTGAGATCAAGAGGAAGAATGCTCCTTTGCCTAGACCTCCTAGTTTGAATGCTTTTGACATCATATCTTTCTCCCCCGGGTTTAATCTCTCTGGGTTGTTTGAGGAGAAGGAGGATGAGACCAGGTTTGTGACTGCTGCACCGGTTAACAGGATTATTTCCAAGTTGGAGGAGATTGCTCAGTTGGTCAGTTTTACAGTGAGGAAGAAGGATTGCAGGGTGAGTTTGGAGGGTACCCGAGAGGGGGTGAAGGGGCCTTTGACTATTGCTGCAGAGATTTTTGAGTTGACACCTTCTTTGGTTGTGGTGGAGGTGAAGAAAAAGGGAGGGGATAAAGCTGAGTATGATAGGTTTTGTAACAATGAATTGAAGCCTGGACTGCAGAATTTGATGAGGGAGGAGTCTGCAACTTCTTCAGAGATGTCGACACCTGAAACTTCCTTGCTACGTGGCCTTTCTGACCCTGTTCAGGATAATTCTTCTGATATCGGAAGCCCATGCTATATACCTTCTGAGGGTTGA 1527 0.4833 MADIASKTPPGTSPMNHHKKEPSNLLLGRFEIGKLLGHGTFAKVYYARNLKTGEGVAIKVIDKEKILKGGLVAHIKREISILRRVRHPNIVQLFEVMATKSKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLISAVGFCHARGVYHRDLKPENLLLDEHGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDLWSCGVVLFVLMAGYLPFHDQNVMAMYKKIYRGEFRCPRWFSPDLSRLLTRLLDTKPETRIAIPEIMENKWFKKGFKQIKFYVEDDRLCNVDDDVLLDNDDDTASIVSTASFSDYSVSESDSEVEIKRKNAPLPRPPSLNAFDIISFSPGFNLSGLFEEKEDETRFVTAAPVNRIISKLEEIAQLVSFTVRKKDCRVSLEGTREGVKGPLTIAAEIFELTPSLVVVEVKKKGGDKAEYDRFCNNELKPGLQNLMREESATSSEMSTPETSLLRGLSDPVQDNSSDIGSPCYIPSEG 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00899 508 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00899 508 MobiDBLite consensus disorder prediction 1 20 - -
Spst6g00899 508 Gene3D Kinase associated domain 1, KA1 346 467 - -
Spst6g00899 508 FunFam Non-specific serine/threonine protein kinase 21 109 - -
Spst6g00899 508 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 20 460 - -
Spst6g00899 508 FunFam Non-specific serine/threonine protein kinase 19 341 - -
Spst6g00899 508 ProSitePatterns Protein kinases ATP-binding region signature. 36 59 IPR017441 GO:0005524
Spst6g00899 508 CDD STKc_SnRK3 29 283 - -
Spst6g00899 508 ProSiteProfiles Protein kinase domain profile. 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00899 508 MobiDBLite consensus disorder prediction 468 508 - -
Spst6g00899 508 Gene3D Transferase(Phosphotransferase) domain 1 20 342 - -
Spst6g00899 508 CDD CIPK_C 352 463 - -
Spst6g00899 508 Pfam NAF domain 348 404 IPR004041 GO:0007165
Spst6g00899 508 MobiDBLite consensus disorder prediction 468 501 - -
Spst6g00899 508 FunFam Non-specific serine/threonine protein kinase 348 466 - -
Spst6g00899 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Spst6g00899 508 SUPERFAMILY Protein kinase-like (PK-like) 26 285 IPR011009 -
Spst6g00899 508 ProSiteProfiles NAF domain profile. 346 370 IPR018451 GO:0007165
Spst6g00899 508 SMART serkin_6 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00899 Spst-Chr6 8275063 8276589 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00899 4 469 CBL-interacting serine-threonine protein kinases AT4G18700 78.373 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Spst6g00899 Pkinase 7.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00899 - - gmx:100814720 865.529