Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00898 ATGGAGAAAAAAGTTTTGATGCAAAAGTATGAGATTGGACGTCTCCTTGGCCAAGGCAATTTCGCCAAGGTTTACCATGCAAGGGACTTGAACACAGGCCAGAGCGTAGCCATAAAAGTTATTAACAAAGAGATGATTATGAAGGTAGGTATGAAGGAGCAAATCAAGCGCGAAATCTCAGTGATGCGTCTTGTGAGGCACCCCAACATTGTGCAGCTATATGAGGTCATGGCAACCAAGACAAAGATATATTTTGCAATGGAAATTGTGAAAGGTGGTGAACTTTTCGATAAAGTGTCCCGAGGGAGGTTGGGGGAGGATGTTGCGAGAAAATATTTCCAGCAGCTAATTGATGCTGTTGATTACTGCCACAGCCGAGGGGTCTATCATCGTGATCTCAAACCAGAGAACCTTCTTGTTGATGAAAATGGAGACCTCAAAATTACAGATTTCGGTTTAAGTGCATTGGTTGAATCCAGAAAAAATGATGGTCTTCTTCACACAATATGTGGAACTCCAGCCTATGTAGCTCCTGAGGTCATAAAGAAAAAAGGATATGATGGAGCCAAGGCAGATATATGGTCTTGTGGGGTGATTCTCTACGTTCTCTTGGCAGGTTTTGTTCCTTTCAATGCTAAGAATTTGATGGAGATGTATAAGAAGATTATCAAAGCAGATTGCCTGTTCCCACCATGGTTCTCGCCAGATGTGAAAAGGCTTATTTATAGGATCCTTGATCCCAATTCAAGGACGAGAATTAGTATTGCTAAGATCGTGCAGAGTCGTTGGTTTAGAAAGGGGTATGTGCAGATTCAAGAATTTCAGCTGCCACCATTGTTCCCTAGAAATGGTGATGATATCTTGGATGTTCAGTCTGCATTTGATTCATCAGATTCAGATTCAGATAGCCCTCCAGTGTCAATTAAAGAAGAAAGCACCTTGAAGCTATATCGATTCAATGCATTTGATTTGATATCACTATCATCAGGTCTAGATCTTTCTGGTTTGTTTGAAAATGATCAGAATGAAAGACAGATGATAAGATTTACTACTAGGGAAAAACCTTCAACTATTGTATCAATGCTTGAAGAGGTAGCACAGATTGATAATAAATTTAAGGTCTTAAAGAAAGATGGGGTTGTTAGATTGGAGGGATGCAAGGCAGGGATAAAAGGTCAACTGACTATAGATGCAGAAATTTTTGAAATTACATCGTCCTTGTATGTTGTTGAAGTGAAGAAAGTTGCCGGAAACACATTTGAATATGGTATATTCTGGGAACAGTACTTGAAACCTTCTCTGAAAGAAATAATTTAA 1317 0.3948 MEKKVLMQKYEIGRLLGQGNFAKVYHARDLNTGQSVAIKVINKEMIMKVGMKEQIKREISVMRLVRHPNIVQLYEVMATKTKIYFAMEIVKGGELFDKVSRGRLGEDVARKYFQQLIDAVDYCHSRGVYHRDLKPENLLVDENGDLKITDFGLSALVESRKNDGLLHTICGTPAYVAPEVIKKKGYDGAKADIWSCGVILYVLLAGFVPFNAKNLMEMYKKIIKADCLFPPWFSPDVKRLIYRILDPNSRTRISIAKIVQSRWFRKGYVQIQEFQLPPLFPRNGDDILDVQSAFDSSDSDSDSPPVSIKEESTLKLYRFNAFDLISLSSGLDLSGLFENDQNERQMIRFTTREKPSTIVSMLEEVAQIDNKFKVLKKDGVVRLEGCKAGIKGQLTIDAEIFEITSSLYVVEVKKVAGNTFEYGIFWEQYLKPSLKEII 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00898 438 ProSiteProfiles Protein kinase domain profile. 10 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00898 438 Gene3D Transferase(Phosphotransferase) domain 1 1 314 - -
Spst6g00898 438 ProSiteProfiles NAF domain profile. 314 338 IPR018451 GO:0007165
Spst6g00898 438 Pfam NAF domain 319 374 IPR004041 GO:0007165
Spst6g00898 438 FunFam Non-specific serine/threonine protein kinase 1 89 - -
Spst6g00898 438 Gene3D Kinase associated domain 1, KA1 316 438 - -
Spst6g00898 438 SMART serkin_6 10 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00898 438 CDD CIPK_C 320 435 - -
Spst6g00898 438 ProSitePatterns Protein kinases ATP-binding region signature. 16 48 IPR017441 GO:0005524
Spst6g00898 438 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 3 418 - -
Spst6g00898 438 SUPERFAMILY Protein kinase-like (PK-like) 6 317 IPR011009 -
Spst6g00898 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Spst6g00898 438 FunFam Non-specific serine/threonine protein kinase 315 438 - -
Spst6g00898 438 FunFam Non-specific serine/threonine protein kinase 3 304 - -
Spst6g00898 438 Pfam Protein kinase domain 10 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00898 Spst-Chr6 8259788 8261104 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00898 5 438 CBL-interacting serine-threonine protein kinases AT5G45820 60.780 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Spst6g00898 Pkinase 2.1e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00898 K07198 - gmx:100807927 688.337