Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00894 ATGGATATGAGATGGAACACATTTGGATTTTGTCTAAGAATTTCTATTTGCTTGATCTCTGTGTGGGGAATCCGAGATTGTTGGTCTATTAATGATGAAGGATTGGCTTTGTTAGCGTTTCAAGGGAGAATAACCTTAGATCCCTTCAATGCTTTGGGAAATTGGAATCCCAATGATAATGATCCTTGCAAGTGGGTGGGTGTTCATTGTGTAAATGGCAAAGTACAGGGGCTGGAATTAAAAGGGTTGTCTTTAGGAGGAACATTAGCTCCTGAGCTTGGCAAACTGAATCACTTAACTTCTCTTGTATTATGCAAGAACAACTTTTCTGGTGTGATTCCCAAAGAATTGGGAGATTTGCCCAAGCTCGATTTATTAGATTTGAGGGAAAATAATCTGTCAGGAGACATCCCAGAACAAATTGGCAAGTTGTCATTGTTAAAAAACTTTGTGTGGCAACGTAACTTCAAAGTATGGAACAAATCAGATTCGTTGATTACTCTACCTAGAGCAACACTGGTTAGATATGTCAATGCCTTTACTTGGCCACTGTTCAAGTTAGGGAAGTCTGCCTCTGATGGTCATGAACAGGATTACTGTGACATTCTGCCTAATTACAACGTGCCAAAGACTGCACAAAATGTACTAGAACTTGTTGGTTCTCGTTCTCCACGTCGTAAATTACTTCAGACCAGTGGTAATAACAACCTGGCAGCAGCACCATTCAGTGACAAACCTACAATAGAGTTTAGCACTATTCCCATTACATTTAGTAGTGGAGCTTTCCCAGCTGTGCCAGATACCAATAAGAACCAATATCAATCACCTGCAATCTCAGATCTACCTGATGCTCCAGATGATAATGCTCCTGATAAAAATCAATCACATACTTCAGATGAAAATCAAACAAGTCAAGATGTAAATAATGCTGCAAAAGTAATATGCCCCTGGAAATCAGGAATAAGTGGACAGTTGCGTAAAGCATTCATAACAGGGGTTCCCAAATTGAATAGAGCAGAGTTAGAGACAGCTTGTGAGGATTTTAGTAACATTGTTGTGAGTGAGTATGAAGAATGTACCATCTATAAAGGAACATTGTCGAATGGGGTTGAGATTGCAGTTGTTTCTACTCTAATTACCTCTTCTCAAGATTGGTCAAAGCACATGGAGATGAAATACCGCAATAAGATTGATACTTTGTCTCGCATAAATCATAAAAACTTTGTTAATCTTATCGGATTCTGTGAAGAGGAAGAACCATTCACTAGAATGCTGGTGTTTGAATATGCCCCAAATGGAAACGTATTTGAGCATATACATGTTGAAGATATGGAAAGTCTTGATTGGGGTGCAAGGGTAAGGATTATCATGGGTGTTGCCTATTGCCTTCAATACATGCATCATGACTTAAATCCACCTGTGGCTCAATCCAAGGTTTCTTCAAAGCGAGTATTTTTAACGGATGATTTTGCTGCTAAGGTTGCAGAGGTTACTTTCAAACAAATTGTGTCAACAAATGAGACAACTGGTGATTCAAAGAAATCTGGCGGGTCATCTCAAGAAGATCTTGAAACCAACGTGTATGACTTTGGATTATTATTACTTGAAATCATATCAGGAAAAGTACTCTACTCTGAAGAAAATGGCAACCTTTTGGACGGGGCTTCTAAGTACCTCAATGACCAAACAAGCATGAAAAACTTGATCGATCCCACCCTCAAATCTTTCAAAGAGAACGAATTTGGTGCCATCTGTGAGGTGATCCAAGAGTGTGTCCAACCTGATCCAAAGTTAAGACCAAGCATGAGAGACGTGACTTCCAAATTAAGGGGACTGCTTGATGTGTCACCTGAACAAGCAGTTCCAAGACTTTCTCCACTATGGTGGGCCGAATTGGAAATCTTGTCAGTGGAGGCCACTTAA 1923 0.3973 MDMRWNTFGFCLRISICLISVWGIRDCWSINDEGLALLAFQGRITLDPFNALGNWNPNDNDPCKWVGVHCVNGKVQGLELKGLSLGGTLAPELGKLNHLTSLVLCKNNFSGVIPKELGDLPKLDLLDLRENNLSGDIPEQIGKLSLLKNFVWQRNFKVWNKSDSLITLPRATLVRYVNAFTWPLFKLGKSASDGHEQDYCDILPNYNVPKTAQNVLELVGSRSPRRKLLQTSGNNNLAAAPFSDKPTIEFSTIPITFSSGAFPAVPDTNKNQYQSPAISDLPDAPDDNAPDKNQSHTSDENQTSQDVNNAAKVICPWKSGISGQLRKAFITGVPKLNRAELETACEDFSNIVVSEYEECTIYKGTLSNGVEIAVVSTLITSSQDWSKHMEMKYRNKIDTLSRINHKNFVNLIGFCEEEEPFTRMLVFEYAPNGNVFEHIHVEDMESLDWGARVRIIMGVAYCLQYMHHDLNPPVAQSKVSSKRVFLTDDFAAKVAEVTFKQIVSTNETTGDSKKSGGSSQEDLETNVYDFGLLLLEIISGKVLYSEENGNLLDGASKYLNDQTSMKNLIDPTLKSFKENEFGAICEVIQECVQPDPKLRPSMRDVTSKLRGLLDVSPEQAVPRLSPLWWAELEILSVEAT 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00894 640 ProSiteProfiles Protein kinase domain profile. 337 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00894 640 Gene3D Ribonuclease Inhibitor 30 175 IPR032675 -
Spst6g00894 640 Pfam Protein tyrosine and serine/threonine kinase 360 609 IPR001245 GO:0004672|GO:0006468
Spst6g00894 640 PANTHER PROTEIN MALE DISCOVERER 2 310 638 - -
Spst6g00894 640 FunFam Leucine-rich repeat receptor-like kinase 35 156 - -
Spst6g00894 640 Gene3D Phosphorylase Kinase; domain 1 320 429 - -
Spst6g00894 640 MobiDBLite consensus disorder prediction 266 308 - -
Spst6g00894 640 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Spst6g00894 640 SUPERFAMILY Protein kinase-like (PK-like) 360 629 IPR011009 -
Spst6g00894 640 SUPERFAMILY L domain-like 28 158 - -
Spst6g00894 640 Gene3D Transferase(Phosphotransferase) domain 1 430 621 - -
Spst6g00894 640 FunFam Inactive receptor-like serine/threonine-protein kinase 320 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00894 Spst-Chr6 8221793 8226447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00894 326 620 Receptor kinase-like Gene Family AT4G31110 30.351 2.07e-33 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Spst6g00894 PK_Tyr_Ser-Thr 4.4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00894 - - vun:114189247 899.042
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00894 6 8221793 8226447 Spst6g00894 6 8221793 8226447 ECH