Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00884 ATGCCCGACTTCAACGACTCCATCGCGCCGCCGTCGCGCCCCGTTCCCGTCCGCGAGGACTGCTGGTCCGAGGAGGCCTCCTCCACCCTTGTCGACGCTTGGGGTCGCCGCTACCTCGAGCTCAACCGAGGCAACCTCCGCCAGAAGGACTGGCAGGACGTCGCCGACGCCGTCAACGCGCTCCATGGCCATACCAAGAAGACGCACCGCACCGACGTCCAGTGTAAGAACCGCATCGACACCATAAAGAAAAAGTACAAGATCGAGAAGGCTAGGGTTTCGTCTTCCAACGGTACTCTCTCTTCCTCCTGGCCTTTCTACGAACGACTGGACGCTCTGATTGGCCCTAATTTCAACGCCAAGAAACCACCTTCCTCCTCGCCTACTCCATCGCCGCCTGTGGCTCTTCCGCTGCTTCCGCATCGGAAGAACCCTTCCTCCTCGCCTGCGATTGCGGTGACACCGACGGCCGTTGCGCTGCCGCAGAAGCGCTCTGCGGCGGCCGCGGCGATGGATGAGGGTTACTTCAGGAGGAATTACTCCGCCGTGGCAGCGGCTGCGGCTGCGGCGGAGGCTGACGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGCGGAGGATGTGGAGGAGGACGAGGAGGATGAAGATGAAGGGAGGGGTAGCGAGGTGGAGGAAGGGGAGAAGGAGAGGGAAGGGATGAGGAGGTTGGCGAAGGCGATAGAGAGGTTTGGGGAAGTGTATGAGAGAGTGGAGGGGCAGAAGCTGAGGCAGATGGTGGATTTGGAGAAACAGAGGATGCAGTTTGCTAAAGATCTTGAAGTTCAGAGGATGCAAATGTTTATGGACACACAGGTTCAGCTCGAGAGAATTAAGCGCGGGAAACGATCTGGCTCTAACGGTGAGATACAATTTCTTTCTGCCTTATTTCCCTATTTGGCTTGA 939 0.5847 MPDFNDSIAPPSRPVPVREDCWSEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSSSNGTLSSSWPFYERLDALIGPNFNAKKPPSSSPTPSPPVALPLLPHRKNPSSSPAIAVTPTAVALPQKRSAAAAAMDEGYFRRNYSAVAAAAAAAEADEEEEEEEEEEAEDVEEDEEDEDEGRGSEVEEGEKEREGMRRLAKAIERFGEVYERVEGQKLRQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRGKRSGSNGEIQFLSALFPYLA 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00884 312 Coils Coil 182 217 - -
Spst6g00884 312 MobiDBLite consensus disorder prediction 187 231 - -
Spst6g00884 312 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 11 293 IPR044823 -
Spst6g00884 312 MobiDBLite consensus disorder prediction 118 150 - -
Spst6g00884 312 MobiDBLite consensus disorder prediction 190 221 - -
Spst6g00884 312 FunFam trihelix transcription factor ASIL2 22 88 - -
Spst6g00884 312 Gene3D - 22 88 - -
Spst6g00884 312 Pfam Myb/SANT-like DNA-binding domain 19 113 IPR044822 -
Spst6g00884 312 MobiDBLite consensus disorder prediction 123 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00884 Spst-Chr6 8131925 8132863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00884 18 298 Trihelix Transcription Factor Family AT3G14180 34.091 7.00e-52 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Spst6g00884 Myb_DNA-bind_4 6.1e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00884 - - gmx:100815241 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00884 6 8131925 8132863 Spst6g00884 6 8131925 8132863 ECH