Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00856 ATGCAAAGGATCAAAACCTTAGGGCGCACTCTCATATTCCCTTCTCACACTCCCTTCCTTCACGACCACTCCCTCCCTCTCTCCCACCTAGACACCGACCCCAACCTCCACCTCACCTTCCGTTACCTCCGCGCGTACACTTCAACCGCTTCAACAACCTCCCTCGACCCCTTCCAAGTCATATCCTCCTCCCTCTCCCACGCGCTCCCCCACTTTTACCCCCTCGCCGCCACGCTACGCCGTCGCCCAACCTCCCCCAACCGCCTTGAACTCTGGTGTGCCGCTGGCCAGGGCGTTCCCCTCGTCCGCGCCGCAGCCGATTTCACTCTCCACTCCGTCCGCCACCTCGACGACCTGGCCTCGCCTCTCGCGGAGCAGTTGGTGCCCGACCCGGGACCCCAGGAGGGGCTGGAGCACCCCTGCATACTCCAGGTGACGGTCTTCGCATGCGGAGGGTTCGTCCTCGGCGCCGCCATTCACCACGCGCTGTGCGACGGCATGGGCGGCACGCTGTTCTTCAACGCGGTGGCGGAGCTGGCGCGTGGGGCCTCGCGGATGACGGTAGAGGCGGTGTGGGAGCGTGACAGGTTGATGGGTCCCAGAGACCCGCCAAGAGTGGATTCAGCGTTAATTTATGAGTTTTTGCGTTTGGAAAAAGGGTTATTGCCGTACGAAGATGGTGTTGGTGGGGTTGCTAGAGAGTGCTTTCACGTGAGGGATGCGGGCTTGGACATGTTTAAGAGGTACTTGTTGGAGCAATCTGGGTTGAACTTCACCGTTTTTGAGGCTCTTGGTGCCTACATTTGGAGGGCTAAGGTGAGGGCCTCTGGAATCGAGGGTCATGAGAAGGTGAAGTTTGCATACTCAATTAACATACGGAGACTAGTAAAGCCACAACTCCCTGGTGGTTACTGGGGAAATGGTTGTGTGCCAATGTACGTAGTGGTGAGTGCCAAAGACTTGGTAGAGAAACCCGTCTGGGAAACTGCAGAGCTAATAAAAAAGAGTAAAAGTAATGTCAGTGATGAGTATGTTCGGTCATACATAGATTATCAGGAGCTGCATTATGGTGATGGGGTCACAGCAGGAAGAGAGGTGAGTGGGTTCACTGATTGGAGGCATTTGGGGCATTCAAGTGTGGACTTTGGGTGGGGAGGCCCAGTTACTGTTTTGCCCCTTGGAAGGAACCTGCTTGGGAGTGTTGAGCCTTGCTTCTTTCTGCCTTATTCAACTACCTCTGCTCATCAGAAGGAGGGCTTCAAGGTTTTGGTGAATCTGAGACACTCTGCATTGCCTGCTTTCAGACAAGACATGCAAGTGTTCTCCAGTAGCCAAGACCAGTGGCCAAGTCACATATAG 1359 0.5548 MQRIKTLGRTLIFPSHTPFLHDHSLPLSHLDTDPNLHLTFRYLRAYTSTASTTSLDPFQVISSSLSHALPHFYPLAATLRRRPTSPNRLELWCAAGQGVPLVRAAADFTLHSVRHLDDLASPLAEQLVPDPGPQEGLEHPCILQVTVFACGGFVLGAAIHHALCDGMGGTLFFNAVAELARGASRMTVEAVWERDRLMGPRDPPRVDSALIYEFLRLEKGLLPYEDGVGGVARECFHVRDAGLDMFKRYLLEQSGLNFTVFEALGAYIWRAKVRASGIEGHEKVKFAYSINIRRLVKPQLPGGYWGNGCVPMYVVVSAKDLVEKPVWETAELIKKSKSNVSDEYVRSYIDYQELHYGDGVTAGREVSGFTDWRHLGHSSVDFGWGGPVTVLPLGRNLLGSVEPCFFLPYSTTSAHQKEGFKVLVNLRHSALPAFRQDMQVFSSSQDQWPSHI 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00856 452 Gene3D - 2 212 IPR023213 -
Spst6g00856 452 Gene3D - 228 438 IPR023213 -
Spst6g00856 452 PANTHER ACYL TRANSFERASE 4 7 441 - -
Spst6g00856 452 Pfam Transferase family 4 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00856 Spst-Chr6 7804908 7806987 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00856 34 394 Monolignol Biosynthesis Gene Families AT5G48930 29.759 2.34e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00856 - - vra:106774544 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00856 6 7804908 7806987 Spst6g00856 6 7804908 7806987 ECH