Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00852 ATGGGTTCAGGCGATTGGTTTAAGACAATAATTAGCTTAAGAAAATCAAAACAAGGCAGATCAAAGAAAGCGAAGGGTGTCTTAGCTCAAGAGAAACTAAATGCATCAAAGTCAAACAATTGTACTGGAAAAGAGTCTAGTGATTTAGCAAATGGTACTAAAAGTGAAAACCTTGTGTCAGATGGGGTGTCAGTTGAAACTATTGCTGCAACAAGGATCCAGACTGCATTCCGAGCTTATAAGGCTAGAAAAGCTTTACGTCGCATGAAAAGATTTACGAAACTGAAGATCCTAACAGAAGGTTTCTCTGTTAAAAAGCAAGCCAGTACAGCTATAACATACCTTCACTCATGGAGCAAGATACAAGCTGAGATCAGAGATCGCCGAATCTGTATGGTAACAGAAGATAGGATCAGGAGGAAGAAACTAGAGTCTCAACTAAAACTGGAGGCGAAGCTGCATGATCTGGAGGTTGAATGGTCTGGTGGTTCTGAAACCATGGAGGAAATCCTTGGAAAGATACATCAGAGGGAAGAAGCAGCAGTTAAGCGCGAAAGAGCCATGGCATATGCTTTTTCCCATCAGTGGAGGGCCAACTCTAGTCAGAGCCAACTGCTAGGTAATTATGAACTTAGCAAGGCTAATTGGGGTTGGAGCTGGAAGGAAAGGTGGATTGCTGCTCGGCCATGGGAAAGCCGTGTCTCCAACTTATCTGTCACCCCAAAGAAATCTCAACATAAGCAGCCAAGCAAGGTTGAGAAAGATAAGAACACATCAACACCTAAAACTCCTATCTCAGCTAAACCTCCTACAGCCATTTCAAAAGGCAATTCAAAAGCTAGGAGATTGTCTTATCCACCAACTGCTGAGAAAACTGTGGTTCAAGGAGTGCAATGA 897 0.427 MGSGDWFKTIISLRKSKQGRSKKAKGVLAQEKLNASKSNNCTGKESSDLANGTKSENLVSDGVSVETIAATRIQTAFRAYKARKALRRMKRFTKLKILTEGFSVKKQASTAITYLHSWSKIQAEIRDRRICMVTEDRIRRKKLESQLKLEAKLHDLEVEWSGGSETMEEILGKIHQREEAAVKRERAMAYAFSHQWRANSSQSQLLGNYELSKANWGWSWKERWIAARPWESRVSNLSVTPKKSQHKQPSKVEKDKNTSTPKTPISAKPPTAISKGNSKARRLSYPPTAEKTVVQGVQ 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00852 298 MobiDBLite consensus disorder prediction 235 298 - -
Spst6g00852 298 PANTHER IQ-DOMAIN 5-RELATED 1 265 - -
Spst6g00852 298 ProSiteProfiles IQ motif profile. 66 94 IPR000048 GO:0005515
Spst6g00852 298 MobiDBLite consensus disorder prediction 259 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00852 Spst-Chr6 7783212 7785773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00852 1 286 IQD Protein Family AT2G33990 53.448 9.89e-90 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00852 - - vun:114186748 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00852 6 7783212 7785773 Spst6g00852 6 7783212 7785773 ECH
Spst6g00852 6 7783212 7785773 Spst3g02059 3 55282959 55285680 ECH