Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00837 ATGGATCAACAACATAAAGTGATTCTTCTGCTGCTGCTTCTTTTCCAAGTTCTGCTTGTAGCATCACAGACAGACAGTCGAGATTATTCTGGCCTAAATTCCCTTACACAATCCTGGAGTAACAAGCCACAAAATTGGGTGGGTCAAGATCCTTGCAGTGGATGGGATGGAATTCGTTGCACCAATACAAGAATTACCCAACTGAGACTTCCAGGCTTGAATTTGGGAGGCCAACTGTCTTCGGCAATTCAGTCTTTATCTGAACTAGATACTCTGGATCTTTCTTACAACACGGGATTGACGGGAACAATTCCAGGAGAGATTGGGAATTTGACCAAGCTAAATTCCCTATCATTGGTTGGTTGTGGTTTCTCTGGTCCTATTCCGGATTCATTAGGAGCTTTATCGCAGCTGACCTTTCTAGCACTGAATTCTAACAATTTCAGTGGAAATATACCACGCTCTCTTGGCAATCTATCAAATATCAATTGGCTTGATCTAGCTGAAAACCAGCTTGAAGGGACTATTCCTGTCTCTGATAACCAAGGACGACCAGGCCTTGACCTGCTCCTTAAAGCACAACACTTTCATATGGGGAGCAATAAGCTCTCTGGTACAATACCAGAAAAACTTTTTAACTCCAGTATGATTCTAGAACACGTGCTTTTTGACCACAATCAACTAGAGGGTAGTGTTCCTACATCCATTAGTTCTGTGAGCACATTGGAAGTTCTGCGCTTAGATAAGAATGGATTAACTGGGGGAGTGCCTGCAAGCATTAGCAAACTCGGAAAACTAAGTGAGATCTATTTATCTCACAATATGCTGAATGGCAGTCTGCCCGATTTTACTGGAATGAATAGTCTCACCTACGTGGACATGAGCAACAATGCTTTCAATGCCTCTGGTATTCCTTCTTGGGCTACAAGTCTGCCAGCACTGACAACAGTGATACTTCAGCAGAACCAGCTCAGGGGGGCGCTAAATCTTAGTAGCTACAGCAAAAGTCTGCAACTCATAAATTTGGAAAGTAATGAGATAACAGAGCTTGACCCCATAAACAATCTTCCAAGTTTTGATATAAGACTAGCTAACAACCCAATTTGTCGTGAAAGTGGAGCTTCTGACAAGAGTTACTGCAAAGTAGCAGTACCCAATCCCTCCTTTTATTCTACACCACCAAATAATTGTTCTCCTCCATCTTGCAGTTCCGATCAGATTTCCAGCCCAAATTGTAAATGTGCATATCCCTATACTGGACTTCTTATATCAAGAGCTATTAGTTTCTCAAACTTCAGCGACGCAAGTTACTATAGGGAGCTTGAGAAGTCTCTGATGGATACTTTCCAAAACCAAAGTATTCCAGTGGATTCAGTTTCCCTTAGTAACCCCATGAAAAATTCTGATGATAATTTTGAGGTGACTCTGCAAGTTTTCCCTTCGCAAAGCGATCGTTTCAATACAACTGGAGTTTTAACTATTGCTTTTCTGCTTAGCAACCAAATTTACAAACCCCCAGAGTTCTTCTCCCCTTACGTTTTCAAGGGTGCTACTTATGACTACACCGGAGAAGAACTAAAAGGATCAACGTCATCACATACCGGGGTTATAGTTGGTGCGGTAGTTGCTGTTATGGTATTTTTTGTAATAGCATCCCTTGCAGGGATGTATGCCATCCGCCAGAATAGAAGAGCAAAAAGATCAGCAGGGTTGAACCCTTTTGCAAACTGGGAACAGAATAAGAATAGTGGCGCTGCTCCTCAGTTGAAAGGAGGACGATGGTTTGCTTTTGACGACCTAAGGAAATACACCAACAACTTCTCAGAAGCCAATACTATTGGATCTGGAGGCTATGGACAGGTTTACCAAGGAACTCTTCCCTCTGGGGAGTTGGTTGCTATCAAACGGGCTGCAAAAGAATCTATGCAGGGTGCTGTTGAGTTTAAAACCGAGATTGAACTTCTATCAAGGGTCCATCATAAGAATCTCGTTAGTCTTGTTGGTTTCTGTTTTGAGAAGGGTGAACAAATGCTGGTGTATGAGTACATTCCAAATGGCACTTTAATGGATAGTCTCTCAGGAAAATCTGGGATCTGGATGGATTGGATAAGGAGGCTTAAAGTAGCATTAGGTGCAGCCAGAGGTCTGGCATATCTTCATGAACTTGCTAACCCACCTATCATACACAGGGACATTAAATCTAGCAATATCCTACTTGATCCGCACCTCAATGCAAAAGTTGCTGATTTTGGTCTCTCTAAACTTCTTGTTGACAGTGAAAGGGGTCATGTCACTACTCAAGTCAAAGGGACAATGGGATACTTGGATCCTGAATATTACATGACCCAGCAGTTAACTGAAAAGAGTGATGTATATAGCTTTGGAGTGCTTATGCTGGAACTAGCAACAGCAAGAAGGCCAATAGAGCAAGGAAAGTATATTGTAAGAGAGGTAATGAGGGTAATGGACACGTCAAAAGATTTATACAACCTTCATTCCATTCTAGATCCAACCATAATGAAAATAAAACCAAAAGGTTTAGAAAAGTTTGTGATGTTGGCTATGAGATGTGTTAAAGAATATGCAGCTGAGAGGCCTACAATGGCTGAGGTTGTAAAAGAGATTGAGAGCATAATCGAGCTTGTTGGATTGAACCCCAATTCTGAATCAGCTACAACATCAGAAACTTATGAGGAGGCAGGTGGAGGAAATGCCCAACATCCTTACAGGGAAGAAGATTTTAGCTATAGTGGAATGTTTCCATCAACAAGGGTAGAACCCCAATAG 2787 0.4187 MDQQHKVILLLLLLFQVLLVASQTDSRDYSGLNSLTQSWSNKPQNWVGQDPCSGWDGIRCTNTRITQLRLPGLNLGGQLSSAIQSLSELDTLDLSYNTGLTGTIPGEIGNLTKLNSLSLVGCGFSGPIPDSLGALSQLTFLALNSNNFSGNIPRSLGNLSNINWLDLAENQLEGTIPVSDNQGRPGLDLLLKAQHFHMGSNKLSGTIPEKLFNSSMILEHVLFDHNQLEGSVPTSISSVSTLEVLRLDKNGLTGGVPASISKLGKLSEIYLSHNMLNGSLPDFTGMNSLTYVDMSNNAFNASGIPSWATSLPALTTVILQQNQLRGALNLSSYSKSLQLINLESNEITELDPINNLPSFDIRLANNPICRESGASDKSYCKVAVPNPSFYSTPPNNCSPPSCSSDQISSPNCKCAYPYTGLLISRAISFSNFSDASYYRELEKSLMDTFQNQSIPVDSVSLSNPMKNSDDNFEVTLQVFPSQSDRFNTTGVLTIAFLLSNQIYKPPEFFSPYVFKGATYDYTGEELKGSTSSHTGVIVGAVVAVMVFFVIASLAGMYAIRQNRRAKRSAGLNPFANWEQNKNSGAAPQLKGGRWFAFDDLRKYTNNFSEANTIGSGGYGQVYQGTLPSGELVAIKRAAKESMQGAVEFKTEIELLSRVHHKNLVSLVGFCFEKGEQMLVYEYIPNGTLMDSLSGKSGIWMDWIRRLKVALGAARGLAYLHELANPPIIHRDIKSSNILLDPHLNAKVADFGLSKLLVDSERGHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELATARRPIEQGKYIVREVMRVMDTSKDLYNLHSILDPTIMKIKPKGLEKFVMLAMRCVKEYAAERPTMAEVVKEIESIIELVGLNPNSESATTSETYEEAGGGNAQHPYREEDFSYSGMFPSTRVEPQ 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00837 928 ProSitePatterns Protein kinases ATP-binding region signature. 613 639 IPR017441 GO:0005524
Spst6g00837 928 ProSiteProfiles Leucine-rich repeat profile. 336 357 IPR001611 GO:0005515
Spst6g00837 928 Pfam Leucine rich repeat 241 298 IPR001611 GO:0005515
Spst6g00837 928 Pfam Protein kinase domain 608 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00837 928 SUPERFAMILY Protein kinase-like (PK-like) 593 886 IPR011009 -
Spst6g00837 928 Gene3D Ribonuclease Inhibitor 185 282 IPR032675 -
Spst6g00837 928 FunFam Leucine-rich repeat family protein 27 181 - -
Spst6g00837 928 ProSiteProfiles Protein kinase domain profile. 607 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00837 928 SUPERFAMILY L domain-like 59 370 - -
Spst6g00837 928 SMART serkin_6 607 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00837 928 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 889 - -
Spst6g00837 928 CDD STKc_IRAK 613 878 - -
Spst6g00837 928 Gene3D Ribonuclease Inhibitor 23 184 IPR032675 -
Spst6g00837 928 FunFam Leucine-rich repeat protein kinase family protein 574 682 - -
Spst6g00837 928 Gene3D Ribonuclease Inhibitor 283 386 IPR032675 -
Spst6g00837 928 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 683 891 - -
Spst6g00837 928 ProSitePatterns Serine/Threonine protein kinases active-site signature. 727 739 IPR008271 GO:0004672|GO:0006468
Spst6g00837 928 Gene3D Phosphorylase Kinase; domain 1 577 682 - -
Spst6g00837 928 Gene3D Transferase(Phosphotransferase) domain 1 683 895 - -
Spst6g00837 928 MobiDBLite consensus disorder prediction 887 928 - -
Spst6g00837 928 FunFam Leucine-rich repeat protein kinase family protein 183 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00837 Spst-Chr6 7647180 7654315 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00837 8 928 Receptor kinase-like Gene Family AT5G49760 52.261 0.0 931
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Spst6g00837 Pkinase 2.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00837 - - gmx:100786172 1607.42