Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00830 ATGAAGAAAATTTCCAAGAGCAGCTGCAAGTCAGCATCACACAGGCTCTTTAAATACAAGGCAAGGAACCATGTTGATGATCTACATGTCATGTTCTTGGATCTACAGTTTGCCAGAAAGGAGAGCCGCACAATTGATGTGGCACTCCTTGAGGAGCAAGTCCATCAAATGCTTCGTGAGTGGAAGGCTGAGCTCAATGAGCCTTCTCCATCTTCTTCTCTGCAGCAAGGTGGTAGTCTTGGTTCATTCTCGACCGATGTCTATAGGCTATTGCAGCTTTGTGAGGAGGAAGATGATGCTACTAGTCCATTAGTTACACCTAAGCCTGAACCTAATGATCAGACTATGCAGGCTGGGGCTAAGGTGATAGTCCAAGAGGGCCAACATCAACAAGAATTCATATTACTTAAAGAATGCAAACACTCCGCTGTAGGGGTTCCCAGCATGGCGGCTAACAACTTGGATGGACCTGCCTTAGAATTTCACCAATTTGATTTCAATAAAGAATTGGATCACAGCTTTTATGCTGGTACAGGTTTTTGTGAGGAAGGTAGTGCTCCTCACATATCTAGCTATCTTCCAAGTGTATGTCCTCCTCCTTCTGCTTTCTTAGGCCCAAAATGCGCACTTTGGGACTGTCCAAGACCTGTTCAAGGGTTGGATTGGTGTCAAGATTATTGCAGTAGCTTTCATGCTGCTCTTGCTTTAAATGAAGGACCACCAGGGATGACCCCAGTTCTAAGACCTGGGGGAATTGGACTCAAGGATAATTTACTTTTTGCTGCTCTTAGTGCAAAGGCACAAGGAAAAGTCGTTGGCATCCCAGATTGTGAGGGAGCAGCAACTGCAAAATCTCCATGGAATGCACCTGAGCTCTTTGATATTTGTGTTCTGGAGGGTGAGACTATTAGGGAGTGGCTTTTCTTTGATAAGCCTAGAAGGGCATTTGAGAGTGGGAACAGAAAGCAGAGGTCACTGCCGGACTATAGTGGGCGTGGATGGCATGAATCTAGAAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAGAGATCCTATTACATGGACCCTCAACCTCTGAACCTTTTTGAGTGGCACCTTTATGAGTATGAAATTAGCAAGTGTGATGCGTGCGCCTTATACCGGTTAGAACTAAAGCTTGTTGATGGGAAGAAGAACTCCAAGGCAAAGATAATAACAGGTGATTCGGTTGCTGATCTGCAGAAGCACATGGGAAGCCTCTCTGCTGAGTTTCACTCTGATAGTAACAAACGGTCTGCCAAAGGTAGAACCAAGCTTGGCATAGGAGGTGGTGTTTATTCAGCTTCTAACAGAGTTGCTCTACTAAATGCACCTTATCAATACGGCTTAACTTCACCATATGACTTTGTTGTTGACAACACAATTCTTTCTCACATGAGTGCTGCATTAGAGGCTGCTGGATACAAAATTCTAACTTGGGAAGATCACCAACAAATGGTGAGTGCTACAAATCATCAGCACAAAGCTGCAGTAATTCATTCCTGA 1524 0.4455 MKKISKSSCKSASHRLFKYKARNHVDDLHVMFLDLQFARKESRTIDVALLEEQVHQMLREWKAELNEPSPSSSLQQGGSLGSFSTDVYRLLQLCEEEDDATSPLVTPKPEPNDQTMQAGAKVIVQEGQHQQEFILLKECKHSAVGVPSMAANNLDGPALEFHQFDFNKELDHSFYAGTGFCEEGSAPHISSYLPSVCPPPSAFLGPKCALWDCPRPVQGLDWCQDYCSSFHAALALNEGPPGMTPVLRPGGIGLKDNLLFAALSAKAQGKVVGIPDCEGAATAKSPWNAPELFDICVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNLFEWHLYEYEISKCDACALYRLELKLVDGKKNSKAKIITGDSVADLQKHMGSLSAEFHSDSNKRSAKGRTKLGIGGGVYSASNRVALLNAPYQYGLTSPYDFVVDNTILSHMSAALEAAGYKILTWEDHQQMVSATNHQHKAAVIHS 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00830 507 PANTHER TRANSCRIPTION FACTOR VOZ1 1 466 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00830 Spst-Chr6 7606135 7608683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00830 3 466 VOZ-9 Transcription Factor Family AT1G28520 65.979 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Spst6g00830 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00830 - - gmx:100784593 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00830 6 7606135 7608683 Spst6g00830 6 7606135 7608683 ECH