Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00819 ATGACATGGTGCAGTAACTCTGATGAGGAGAGGAGGATTGAATCAATCACGCCAACTATGAGCCTCACTCCAACCACTGATGTTAACATAAAACTCACCGAAGAAATTCGAACTGTAACATGCGCCTCGTGCGGCCATAACATCGAATTCAAAGATCAGGGTGGAATTCATGACTTACCGGCGTTACCAGCTGGAGTGAAATTTGACCCAAGTGACCAAGAAATACTAGAACATTTAGAGGCAAAAGTGGCGTCTGATGCATGCAAGCTTCATCCCCTAATTGATGAGTTCATACCAACGCTTGAAGGCGAGAATGGGATTTGTTCTACACACCCAGAAAAACTACCAGGAGTTAGCAAAGATGGACAGATCCGCCACTTCTTTCACAGGCCATCAAAGGCATACACAACTGGAACAAGGAAAAGAAGAAAGGTTCACACAGACGAAGAAGGAAGTGAAACAAGATGGCACAAAACGGGAAAAACTAGAGCCGTTTTTGCCGCTGGTGATGCTGTGAAAGGTTTTAAGAAAATACTAGTACTCTACACCAACTACGGGAGGAAAAAGAAGCCGGAGAAGACTAATTGGGTGATGCATCAATACCATCTTGGCAGCAGTGAAGAAGAGAAAGATGGAGAATTAGTTGTTTCAAAGGTCTTCTATCAGACACAACCTAGACAATGTGGTAATAATCCCATTATCATAAAGGATCCGTACGAAAAAATGTTGAATATTGATGCAAGTGGCCACAACAAATCTACATCAATACCTAAAACTTCAACTCTTGTGGATTGCTACAATGTTCCTTACATAAATTATGATCATGTCTTGAGTTATAATAGGGAAAGCTCCCCACAACTAATTACTCCCAACTCTGTTGGTCAAGCTGATGGCTCTTACATTTCCTATGCATTGGATGCAAAGAAACCAAGATTTGAAACTAACACTAGAGCTTCTAGGTAG 963 0.4164 MTWCSNSDEERRIESITPTMSLTPTTDVNIKLTEEIRTVTCASCGHNIEFKDQGGIHDLPALPAGVKFDPSDQEILEHLEAKVASDACKLHPLIDEFIPTLEGENGICSTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRAVFAAGDAVKGFKKILVLYTNYGRKKKPEKTNWVMHQYHLGSSEEEKDGELVVSKVFYQTQPRQCGNNPIIIKDPYEKMLNIDASGHNKSTSIPKTSTLVDCYNVPYINYDHVLSYNRESSPQLITPNSVGQADGSYISYALDAKKPRFETNTRASR 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00819 320 ProSiteProfiles NAC domain profile. 62 222 IPR003441 GO:0003677|GO:0006355
Spst6g00819 320 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 20 234 IPR044799 GO:0003700
Spst6g00819 320 SUPERFAMILY NAC domain 57 222 IPR036093 GO:0003677|GO:0006355
Spst6g00819 320 Gene3D NAC domain 71 226 IPR036093 GO:0003677|GO:0006355
Spst6g00819 320 MobiDBLite consensus disorder prediction 135 154 - -
Spst6g00819 320 FunFam NAC domain-containing protein 73 71 226 - -
Spst6g00819 320 Pfam No apical meristem (NAM) protein 63 203 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00819 Spst-Chr6 7483827 7486778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00819 1 231 NAC Transcription Factor Family AT4G28500 70.085 3.52e-119 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Spst6g00819 NAM 6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00819 - - gmx:100809389 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00819 6 7483827 7486778 Spst6g00819 6 7483827 7486778 ECH