Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00818 ATGTTCGAGTTGAGGAAGCTTTTAATCTATGTTCGGAAAGTAGAATTCTTGTGCTTCCTTCTTAGTGGGTTTTACAGGCTGAAGATTGGGTACGCCTCCGATCAGAGTTTCGAACAGATAACGACACTGAATGTTGGGTTTTTGGTTTCCAAGATAGACCATGATGTGATGGCAGCAACTGGTGCAATACTAATACTATTATCATTACTACCACTTTATCACTTATTTCTTTCTCATGAGCACACTCCATATCCTTCCACCAAATCCAGCAAGCAACCAGATTCTCAGTTGTCTGATTACAAAAACAATAAAAGCCAAAGCCATATCGATCCTACCAAGCCGTTCAAAACATCCATCACAACACTAAAAATGAACCATGTTGAGCACATCACTTATGACATGGTCATGATCACTCTATCCATATCTCTCATCGTTCTTGGCATCATCCTCTTCCTTGCTTGCAAGAAGAAACCCGTTGAATCTGAAGAAACACTTCCCGTTAAGCTGTGTGCTCGTGCATACCCTTTGATGGAAGTTGATGCTGTCACCGATGGCTTCAATCATAGGAGAATCATTGGCCAGGGTCGCTTAGGAACTGTGTATGCAGGGACGCTAGAGAAAGAAGAGCTTGTAGCTGTTAAGAGGATTCACCCCGTTCTTGTGTTGAGCAATGCAGGGTTTGGTTTCTCATCCGTGTTGAAATGGCTGTCCTTGGCTCAACACCCCAACATAGTTCCAATCATAGGTTTCTCAGAAGCACCGGGTGAAAGAGTTATTTTGATGGAGTTTGTGCACATGGCAAGCTTGGACTTCTACTTGCATCAAAACCAAGACGGGGCTTCGCTTTTGGATTGGAACAAGAGGTTCAGGATTGCAGCTGGAGCAGCTAGAGGGCTTCAATACTTGCATGAAGTGGTGGCACCAAACATTATACATGGGTGTGTTAAGTCCTCTAATATTCTCATTGATGTCAACTTCTGTGCCAGGATTTGTGATTATGGGCTTAACTTTTTGGCGCCTGTGGAAAAGAGAGGGCTAGTGGGGTATGTGGATGATGAGTATTGGAGTGAAAGGAGGGGTGGTGCAGCTACCAAGGAGAGTGATGTTTATGGGTTAGGGGTGGTCCTGTTGGAGCTTTTAACTGGGAAAGGGTGTGAGGGAGGATTGTTGGTGAAGTGGGCATTGCCTTTGATCAAAGAAACAAGTTTTAGTGAACTTTTGGATCCTAGGTTGGTGATTCCTTCTGACATGAAGCCTCTGGTTAGATTAGCCAAAGTAGCCTCAGCATGTGTAGGTAACTCACGGAAATGTAGGCCTTCGGTGGCTCAAGTGGCAACCATTTTGAACAATTTAGAAACTGAAGTGTGCCTCTCATCCCCCACGATGATGTAG 1392 0.4432 MFELRKLLIYVRKVEFLCFLLSGFYRLKIGYASDQSFEQITTLNVGFLVSKIDHDVMAATGAILILLSLLPLYHLFLSHEHTPYPSTKSSKQPDSQLSDYKNNKSQSHIDPTKPFKTSITTLKMNHVEHITYDMVMITLSISLIVLGIILFLACKKKPVESEETLPVKLCARAYPLMEVDAVTDGFNHRRIIGQGRLGTVYAGTLEKEELVAVKRIHPVLVLSNAGFGFSSVLKWLSLAQHPNIVPIIGFSEAPGERVILMEFVHMASLDFYLHQNQDGASLLDWNKRFRIAAGAARGLQYLHEVVAPNIIHGCVKSSNILIDVNFCARICDYGLNFLAPVEKRGLVGYVDDEYWSERRGGAATKESDVYGLGVVLLELLTGKGCEGGLLVKWALPLIKETSFSELLDPRLVIPSDMKPLVRLAKVASACVGNSRKCRPSVAQVATILNNLETEVCLSSPTMM 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00818 463 PANTHER OS01G0253100 PROTEIN 129 452 - -
Spst6g00818 463 MobiDBLite consensus disorder prediction 83 112 - -
Spst6g00818 463 Gene3D Phosphorylase Kinase; domain 1 152 263 - -
Spst6g00818 463 Pfam Protein tyrosine and serine/threonine kinase 189 446 IPR001245 GO:0004672|GO:0006468
Spst6g00818 463 FunFam Receptor protein kinase CRINKLY4 264 455 - -
Spst6g00818 463 ProSiteProfiles Protein kinase domain profile. 186 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00818 463 FunFam serine/threonine-protein kinase-like protein ACR4 153 263 - -
Spst6g00818 463 Gene3D Transferase(Phosphotransferase) domain 1 265 458 - -
Spst6g00818 463 SUPERFAMILY Protein kinase-like (PK-like) 164 448 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00818 Spst-Chr6 7473742 7478565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00818 171 448 Receptor kinase-like Gene Family AT3G59420 39.726 1.20e-52 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Spst6g00818 PK_Tyr_Ser-Thr 5.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00818 - - vun:114187437 641.343