Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00814 ATGGAGGCTGAGCCAGAGAACAACGAGTTGAAGAGGGAAGAAAACAGCAATGACAACAACAACAACAATGAAAGTAACAGCAAATTTGGAAATTCGAGTGAGGGTCAGAGCAAGCCCAAGCGCCAGATGAAGACGCCGTTTCAGCTTGAGACGCTCGAGAAAGCTTATGCTGTGGAGAATTACCCGTCCGAGATGATGAGGGCGGAGTTGTCGGAGAAGTTGGGGCTGTCGGATCGGCAGTTGCAGATGTGGTTCTGTCACCGGCGGTTGAAGGACAAGAAGGACTTGCCGTCAAAGAAGCCACGTAAGTCGGCGGCGTTGCCTGATTCTCCGGTCGACGAGCCCAAACTGGCTTCTGAAGTGGGTGCTGAATATGGATCCGGGTCGGGTTCAGGATCCAGCCCGTTTAGCCGTTCGGAGTTGAGGAATGTGGTGCCGCGGGGTTACTATGAGTCGCCACAGACTATAATGGAGCTTAGAGCAATTGCTTGTGTGGAGGCTCAGTTGGGGGAGCCTTTAAGGGAAGACGGGCCTATTCTTGGAGTGGAGTTTGATCCGTTGCCACCGGATGCATTTGGGGCACCCTTAGCTGTTACAGATCCTCAGAAGCGGCCTAGTCTTGCCTATGACAGTAAAATATATGAAAGACATGATGTTAGGACAAATAAGGCAATAACAAGGACATTCCATGAGTATCCCTTCCTTCCAAACCAGTCTGGCATTAGATCTGATGTTTTTGGACAACTAAACCTACCTCATTTACATGAACCAATGGAGGGTCCTGCAAGAACTCCTTTTCCCCTTGGAAATGAACAGCAACCTAGAATTCATACTCCCCAAAGTCATTCTTCTCGTGTCCGTCTTTTGTCTCAACCACAGGACAAACAAGTGATTCCCTATCCATCTCCCCCTCGAGAAAATGATGTTGTACCCAAAAGGGAACCTAACACAAACATTACCAATGCTGTAATGAACTCCCACTATACTGATCACCCAATTGTTGGGCAAGAAATTCCATATGCTTTACCTAGTGGGCAAGTATCCCATAACGATGCAGTGTTGAGGATGGAGAGGAAACGAAAGAGTGATGAAGCCAGAGTTGCAAAGGAAGTTGAAGCCTATGAAATGAGGATGCGGAAAGAGCTTGAGAAACAAGATAACCTCAGACGAAAGAGTGAAGAGAGGATGAAGAAAGAAATGGAAAGGCTAGATCGTGAAAGAAGGAAGGAAGAAGAGAGGTTGATGCGTGAAAAACAACGAGAAGAGGAAAGATCAAAACGTGAACAAAGGCGGGAAATGGAGCGAAGGGAAAAATTTTTGTTGAAAGAACATTTGAGAGCTGAGAAAAGGAGGCAAAAAGAAGAGATTCGCAAAGAGAAGGAGGAAGAGAGGAGGAAAGCTGCACTTGAGAAGGCAAATGCTCGGAGAATAGCTAAAGAATCCATGGAGCTCATCGAGGATGAACAACTGGAATTGATGGAGTTGGCTGCTGCAAGCAAGGGTCTTTCCTCTATTATTCATATTGATCTTGATACTTTGCAAAACCTTGAATCATTTAGGGCTTCATTGTGTGTATTTCCACCCAAGAGTGTAAAACTGAGAAAACCATTTGCTATCCAACCCTGGAGCAACTCAGAACAGAATGTTGGCAACCTTCTCATGGTTTGGAGATTCTTGATTACTTTTGCTGATGTTCTTGATTTATGGCCTTTTACTCTTGATGAGTTTGTACAGGCATTTCATGACTATGATTCTAGATTGTTGGGTGAGATACATGTTGCCCTTCTCAAGGTGATAATAAAGGACATTGAAGATGTTGCTAGGACGCCTTCTACAGGATTAGGGATCAATCAGAACGGAGCTGCTAATCCTGGAGGTGGCCATCCTGAGATTGTGGAAGGAGCATATGCATGGGGCTTTGACATACGAAATTGGCAGAGGAACTTAAATCAATTGACATGGCCAGAGATTTTCCGACAGTTAGCATTGTCTGCAGGATTAGGGCCGCAGCTGAAGAAAAGAAGTATTACGTGGTCATATGCAATTGATAAAGACGAGGGGAAAAGTTGCGTAGATATCATTTCTACACTACGTAATGGTTCAGCAGCTGAAAGCGCTGTGGCCAAAATGCAAGAGAGAGGTCTGTTAGCTCCTCGAAGATCAAGGCACCGGCTAACTCCTGGAACAGTTAAGTTTGCAGCATTTCATGTTCTCTCGCTGGAGGGGAGTAAGGGTTTGACAGTACTAGAACTTGCAGAAAAAATTCAGAAATCTGGTCTCCGGGACCTGACAACCAGCAAGACACCTGAAGCATCAATTTCTGTTGCTTTGACAAGAGACACTAAATTGTTTGAAAGAATAGCTCCATCAACATATTGTGTACGAGATGCATTCAGAAAGGATCCTGCTGATGCTGATTCTATTCTTTCAGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTTTTAGCTGGTGAAGATGGTGATGATGTTGAAAGAGAAGAGGAGTCAGAAAGTGATGAAGTTGATGAGGACCCTGAAGATGATGATTTAGTAAATCCTTCAAGTGCAAACCAAATGTCTGAACAGTATGATGACAAAAACATTTGCTCATCAAATGGAAAAGAAAATTTGGGACACAACATTGATATTATACAAAATGATTTTGATACAGACCTACCCTGTTTTCCTAAGAATGGTTCCACGGATGCTGATTGTCCCAGTTCTGTAAACAGACCTGCTACTTGTCAAGATGTAAATGCTGGCAGTCTTGATCAGGATAATATGGAAATTGATGAAAGCATATCTGGTGAGTCCTGGATTCTAGGGCTTGCAGAAGGAGAATATTCTGATCTCAGCGTAGAGGAGCGTCTAAATGCTCTTGTTGCTTTGGTTGGTGTGGCAAATGAAGGAAATTCTATCCGTGTTGTCCTTGAGGATCGACTGGAATCAGCAAATGCTCTGAAGAAACAAATGTGGGCAGACGCACAGATAGACAAAGTTCGTCTGAAAGATGATAATATTAGTAAATTAGATTTTCCATCTCTTACTGGGAATAAAGTTGAAACACAGCATACATATCCAGCTGTGGAGGGAAACCAAAGTCCAATGCTTGACATCAATATTAACAATAATGAAGTATCACCCAGCACTGCAGAAAACCAAAAAGGAGCTCCTGTTGCACAGAGCATACTTATGGAGAAGTCCTCATCAATTCAAGATTTTGGCACGAGTACTGGTGCAGACATCCCTCAGACTCAGGTACCTGTGCAATATTCGAAAAGGTCACGTTCACAGTTGAAATCTTATTTTGCCCACCTAGCGGAGGAGATGTATGTCTACAGGTCTTTACCCCTTGGCCAAGATCGCAGACGAAATCGATATTGGCAGTTTGTTGCATCTGCATCTAGCAATGATCCTGGTTCTGGCAGGATCTTTGTTGAATGTCATGATGGCAAGTGGTGGCTTATTGATTCTGAGGAGGCCTTTGATGCTCTTTTGACATCATTGGATTCACGTGGGCTCAGGGAATCTCATTTGCGCTTAATGATGCAAAAGATTGAGAATTCCTTTAAAGAAAATGTTCGAAAAAGGAACTCACATTGTGCAAAAATTGGAAGCAAAGGCGAAGTTTCTATAAAATTTGAAGCTAATGAACCATATTCTATCCCTGACCACAGTGCTGGATCTGACAGTCCTAGCAGTACCCTCCATGACTTGAACACTGATAATACATTGGAAACTTCATCATCCTTCAAAATCGAACTTGGGAAAACTGAGAGTGAGAAGAAAGCTGCCTTGAGAAGGTATCAAGATTTTCAGAAGTGGTTGTGGAAAGAATGCTATAATTCGTCAGTGTTATGTGCAATGAAGTATGGGATAAAGAGATGCAAACCTCAGATGGACTTTTGTGATAACTGTCTCAATCTCTATTTTGTTGATGACTCCCATTGCAGTTCCTGCCACCGGACTTTTCCTTCAAATAATGGATTTAATTTTTCTAAACATGCATTTCAATGTCGAGAGAAGTTATCCAAAGATAATTGTATTCTGGAATACTCTCTTCCCTTGCGAACAAGATTGCTTAAGGTCCTGTTGGCTTGTATGGAGGTATCTGTTCTATCTGAAGCATTTAGAACAAATTGGACTGATGATATTAGGAAGCACTGGGGTGTAAAGTTGAGCAAATCATCTTCTGTTGAGGAACTTATACAGATATTGACCTTATTTGAGAAAGCACTACGGCGAGATTTTCTGTCATCAAACTTTTCTACAACAGATGAATTGTTGAGATCAAGCAGTGTGTCAGAATGTTCTGTGCAGGCTTCAACTGACCCTGATTCTGTTGCTGTGCTTCCATGGGTTCCGCTAACGACTGCAGCTTTGTCTCTCAGACTCTTCGAGATTGATTCATCCCTCAGTTATGTAAAGCCTGAAAGGCTTGAACCTTGTGAGGAGAAAGAAGCCAGAGAATACATAAAGCTTCCATCAAGATACAGTCAATTGAAATCTAATAGGGAGGTTGAACAAGCAGAATATGACCATGATGAATTCGCTAAAGATAAATCTGTTCCAAAGAAAATTGTACGAAGTGGCAATAAACGTAGTCGTGGGACTAATGAACAAGGACGGGGCAAAAAGCTGGCTAAAAGAGTGTGCAATTCCAAACGAGATGGTGGTCGGAAGAATGCTAAGGTCACTGTCAATCTTAGTCACAAATTAAAACAGCAGGCACGAGGAACACAAGGACAAGGTGCAGGGCGAGGTCGCCGAACAGCAAGAAAGCGGAGAGTGGGAAAACGAGCTGTTGAAGATTTGTTGCTTGGCCATTCGACTGCCAGTCATATCTCGAAGATTAATAGAGAACCATTGAGAAATGTGGATGAGGAATGGGATGAAGGAAAGGAAAGTCCCATGACTCCGGTACACATTGGGGTTGCTGCTGACAATAGTAATAGTGCGGAAGAGGTAGAATCTGACGATGACCGTGCTCAAGCTGTTGAATATGATCAAGGAAACTGGGAGGTAGGTTTTAACGGTGTTCCCCCCAACAGATGGAGTAGGGATTTGGTTGGAATGAGTGACGAAGATGTGGATGTTTTTGAAGATGACAACGACAACGGCATTGAAGAAAATGAAGATGAGGATTCAGAAGCAGATGTTATGAGTGAGGGTTCAGATGGGATGGAAAATAGAGTAGTAAATGTTGGAGGCTCATACTCAGCTTTGTCTGAAGATTCTTCTGATTAG 5253 0.4297 MEAEPENNELKREENSNDNNNNNESNSKFGNSSEGQSKPKRQMKTPFQLETLEKAYAVENYPSEMMRAELSEKLGLSDRQLQMWFCHRRLKDKKDLPSKKPRKSAALPDSPVDEPKLASEVGAEYGSGSGSGSSPFSRSELRNVVPRGYYESPQTIMELRAIACVEAQLGEPLREDGPILGVEFDPLPPDAFGAPLAVTDPQKRPSLAYDSKIYERHDVRTNKAITRTFHEYPFLPNQSGIRSDVFGQLNLPHLHEPMEGPARTPFPLGNEQQPRIHTPQSHSSRVRLLSQPQDKQVIPYPSPPRENDVVPKREPNTNITNAVMNSHYTDHPIVGQEIPYALPSGQVSHNDAVLRMERKRKSDEARVAKEVEAYEMRMRKELEKQDNLRRKSEERMKKEMERLDRERRKEEERLMREKQREEERSKREQRREMERREKFLLKEHLRAEKRRQKEEIRKEKEEERRKAALEKANARRIAKESMELIEDEQLELMELAAASKGLSSIIHIDLDTLQNLESFRASLCVFPPKSVKLRKPFAIQPWSNSEQNVGNLLMVWRFLITFADVLDLWPFTLDEFVQAFHDYDSRLLGEIHVALLKVIIKDIEDVARTPSTGLGINQNGAANPGGGHPEIVEGAYAWGFDIRNWQRNLNQLTWPEIFRQLALSAGLGPQLKKRSITWSYAIDKDEGKSCVDIISTLRNGSAAESAVAKMQERGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDTKLFERIAPSTYCVRDAFRKDPADADSILSEARKKIQIFENGFLAGEDGDDVEREEESESDEVDEDPEDDDLVNPSSANQMSEQYDDKNICSSNGKENLGHNIDIIQNDFDTDLPCFPKNGSTDADCPSSVNRPATCQDVNAGSLDQDNMEIDESISGESWILGLAEGEYSDLSVEERLNALVALVGVANEGNSIRVVLEDRLESANALKKQMWADAQIDKVRLKDDNISKLDFPSLTGNKVETQHTYPAVEGNQSPMLDININNNEVSPSTAENQKGAPVAQSILMEKSSSIQDFGTSTGADIPQTQVPVQYSKRSRSQLKSYFAHLAEEMYVYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVECHDGKWWLIDSEEAFDALLTSLDSRGLRESHLRLMMQKIENSFKENVRKRNSHCAKIGSKGEVSIKFEANEPYSIPDHSAGSDSPSSTLHDLNTDNTLETSSSFKIELGKTESEKKAALRRYQDFQKWLWKECYNSSVLCAMKYGIKRCKPQMDFCDNCLNLYFVDDSHCSSCHRTFPSNNGFNFSKHAFQCREKLSKDNCILEYSLPLRTRLLKVLLACMEVSVLSEAFRTNWTDDIRKHWGVKLSKSSSVEELIQILTLFEKALRRDFLSSNFSTTDELLRSSSVSECSVQASTDPDSVAVLPWVPLTTAALSLRLFEIDSSLSYVKPERLEPCEEKEAREYIKLPSRYSQLKSNREVEQAEYDHDEFAKDKSVPKKIVRSGNKRSRGTNEQGRGKKLAKRVCNSKRDGGRKNAKVTVNLSHKLKQQARGTQGQGAGRGRRTARKRRVGKRAVEDLLLGHSTASHISKINREPLRNVDEEWDEGKESPMTPVHIGVAADNSNSAEEVESDDDRAQAVEYDQGNWEVGFNGVPPNRWSRDLVGMSDEDVDVFEDDNDNGIEENEDEDSEADVMSEGSDGMENRVVNVGGSYSALSEDSSD 1750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00814 1750 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 13 1750 IPR044977 GO:0006357
Spst6g00814 1750 MobiDBLite consensus disorder prediction 19 44 - -
Spst6g00814 1750 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 937 980 IPR028942 -
Spst6g00814 1750 Coils Coil 371 477 - -
Spst6g00814 1750 MobiDBLite consensus disorder prediction 385 432 - -
Spst6g00814 1750 MobiDBLite consensus disorder prediction 1697 1750 - -
Spst6g00814 1750 MobiDBLite consensus disorder prediction 829 852 - -
Spst6g00814 1750 MobiDBLite consensus disorder prediction 1226 1244 - -
Spst6g00814 1750 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1116 1188 IPR028941 -
Spst6g00814 1750 ProSiteProfiles HARE-type HTH domain profile. 728 797 IPR007759 GO:0006355
Spst6g00814 1750 Pfam Homeodomain 38 94 IPR001356 GO:0003677
Spst6g00814 1750 MobiDBLite consensus disorder prediction 1697 1724 - -
Spst6g00814 1750 MobiDBLite consensus disorder prediction 1 48 - -
Spst6g00814 1750 MobiDBLite consensus disorder prediction 1 18 - -
Spst6g00814 1750 MobiDBLite consensus disorder prediction 271 287 - -
Spst6g00814 1750 Pfam DDT domain 548 602 IPR018501 -
Spst6g00814 1750 MobiDBLite consensus disorder prediction 1530 1550 - -
Spst6g00814 1750 MobiDBLite consensus disorder prediction 825 873 - -
Spst6g00814 1750 MobiDBLite consensus disorder prediction 258 287 - -
Spst6g00814 1750 SMART HOX_1 37 99 IPR001356 GO:0003677
Spst6g00814 1750 MobiDBLite consensus disorder prediction 94 115 - -
Spst6g00814 1750 CDD homeodomain 40 94 IPR001356 GO:0003677
Spst6g00814 1750 ProSiteProfiles DDT domain profile. 546 605 IPR018501 -
Spst6g00814 1750 SMART testlast3 546 605 IPR018501 -
Spst6g00814 1750 Gene3D - 21 96 - -
Spst6g00814 1750 MobiDBLite consensus disorder prediction 1225 1244 - -
Spst6g00814 1750 ProSiteProfiles 'Homeobox' domain profile. 35 95 IPR001356 GO:0003677
Spst6g00814 1750 Pfam HB1, ASXL, restriction endonuclease HTH domain 728 796 IPR007759 GO:0006355
Spst6g00814 1750 MobiDBLite consensus disorder prediction 94 109 - -
Spst6g00814 1750 MobiDBLite consensus disorder prediction 853 873 - -
Spst6g00814 1750 SUPERFAMILY Homeodomain-like 25 94 IPR009057 -
Spst6g00814 1750 MobiDBLite consensus disorder prediction 1574 1599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00814 Spst-Chr6 7433505 7443323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00814 31 1680 Homeobox Transcription Factor Family AT1G28420 49.097 0.0 1321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Spst6g00814 WSD 1.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00814 - - gmx:100777465 2867.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00814 6 7433505 7443323 Spst6g00814 6 7433505 7443323 ECH
Spst3g01651 3 20013077 20015696 Spst6g00814 6 7433505 7443323 PCT