Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst6g00798 | ATGGCGCCCAGGGATAAGGCCTCTGCCGTTAAGGTTAACGCCAACGCTAACGGGAACGCCGGCCTCAAGGAGGTGCATTTTCGGGGAGTCAGGAAGAGGCCCTGGGGAAGATATGCCGCCGAGATCAGAGATCCCGGCAAGAAGAGCCGCGTTTGGCTCGGCACCTTCGACACCGCCGAGGAGGCCGCTCGTGCGTACGACACCGCCGCTCGCGAGTTTCGCGGCCCCAAGGCCAAGACCAATTTCCCTCTTCCATCCGATAACAATGTCAAGAACGCTAGCCCTAGCCAGAGCAGTACCGTCGAATCCTCCAGCCGCGACCGCGACCTCGCCGCCGATTCCTCCCCGCTCGACCTCAACCTCGTCCCCACCGCCGTCTCCACCGCCCGTTTTCCCTTCCAGCACCAGTTCCCCGTTTTTCCGGCGGCCGCCAACCAGGTTTTGTACCTCGACGCTGTCCTACGCGCCGGTATGGGCGGTCCACGTGGCTTTGGGTTTGGCTACAATCAGCATCCCGTTGCCGCGAGTGAGCTCCACGCGACGGCGAGCGACTCGGACTCGTCCTCCGTGATCGATCTGAATCACAACGAAGGCGATGTCAAGGGGAACGGCTCTAGAATCTTCGATCTCGACCTTAACCATCCTCCTCCGCAGGAGATGGCTTGA | 666 | 0.6171 | MAPRDKASAVKVNANANGNAGLKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDTAAREFRGPKAKTNFPLPSDNNVKNASPSQSSTVESSSRDRDLAADSSPLDLNLVPTAVSTARFPFQHQFPVFPAAANQVLYLDAVLRAGMGGPRGFGFGYNQHPVAASELHATASDSDSSSVIDLNHNEGDVKGNGSRIFDLDLNHPPPQEMA | 221 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst6g00798 | 221 | MobiDBLite | consensus disorder prediction | 196 | 221 | - | - | |
Spst6g00798 | 221 | SUPERFAMILY | DNA-binding domain | 26 | 84 | IPR016177 | GO:0003677 | |
Spst6g00798 | 221 | MobiDBLite | consensus disorder prediction | 82 | 105 | - | - | |
Spst6g00798 | 221 | Pfam | AP2 domain | 26 | 75 | IPR001471 | GO:0003700|GO:0006355 | |
Spst6g00798 | 221 | SMART | rav1_2 | 26 | 89 | IPR001471 | GO:0003700|GO:0006355 | |
Spst6g00798 | 221 | MobiDBLite | consensus disorder prediction | 76 | 114 | - | - | |
Spst6g00798 | 221 | PRINTS | Ethylene responsive element binding protein signature | 27 | 38 | IPR001471 | GO:0003700|GO:0006355 | |
Spst6g00798 | 221 | PRINTS | Ethylene responsive element binding protein signature | 49 | 65 | IPR001471 | GO:0003700|GO:0006355 | |
Spst6g00798 | 221 | FunFam | Ethylene-responsive transcription factor 2 | 25 | 84 | - | - | |
Spst6g00798 | 221 | CDD | AP2 | 26 | 83 | IPR001471 | GO:0003700|GO:0006355 | |
Spst6g00798 | 221 | Gene3D | AP2/ERF domain | 25 | 84 | IPR036955 | GO:0003700|GO:0006355 | |
Spst6g00798 | 221 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 15 | 160 | - | - | |
Spst6g00798 | 221 | ProSiteProfiles | AP2/ERF domain profile. | 26 | 83 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst6g00798 | Spst-Chr6 | 7229643 | 7230308 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst6g00798 | 1 | 217 | AP2-EREBP Transcription Factor Family | AT5G44210 | 42.544 | 1.24e-41 | 138 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Spst6g00798 | AP2 | 5.6e-15 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst6g00798 | K09286 | - | gmx:100170742 | 350.132 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst6g00798 | 6 | 7229643 | 7230308 | Spst6g00798 | 6 | 7229643 | 7230308 | ECH |