Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00783 ATGGGCGTTCTTGATTTTGGGACTGAATGTTTACGAACACAACTTCTTTTGCAGTTTAACGTTGCAAATCCCACCACCGGTTGTCAGAAGAAGCTGGAGATCGATGACGACCAGAAGCTACGAGCATTTTGGGACAAGAGGATCTCACAAGAGGTTCTTGGTGATGCTTTGGGCGAGGAATTCAAAGGCTATGTCTTCAAAATCACTGGAGGTTGTGACAAGCAAGGGTTTCCAATGAAGCAGGGAGTGTTGACCCCTGGCCGTGTTCGCCTCTTGCTGCACAGAGGAACTCCTTGTTTCCGTGGTTACGGAAGGCGCAATGGAGAGCGCAGGAGGAAGTCTGTCCGTGGGTGCATTGTAAGCCCAGACCTGTCTGTTCTGAACTTGGTAATTGTAAAGAAGGGTGAAAATGATTTACCAGGCCTGACAGATGTTGAAAAGCCAAGGATGAGGGGTCCAAAGAGAGCTTCCAAAATTCGCAAACTGTTCAACCTGTCTAAGGAGGATGATGTGAGGAAGTATGTCAATACATATAGGAGAACATTTACAACTAAAGCTGGGAAAAAGGTGAGCAAGGCTCCAAAAATCCAACGACTGGTCACTCCCCTGACCCTCCAAAGAAAGAGAGCAAGGATCGCAGATAAGAAGAAGAGAATTGCCAAGGCAAAATCAGAGGCAGCAGAGTACCAGAAACTTCTTGCCTCCAGATTGAAGGAGCAGAGAGAACGCCGGAGTGAGAGCTTGGCTAAGAGACGATCAAAACTTTCCAGTGCTACTAAACAAGCTGCCACAGCATAA 798 0.4724 MGVLDFGTECLRTQLLLQFNVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVLGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSSATKQAATA 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00783 265 ProSitePatterns Ribosomal protein S6e signature. 68 79 IPR018282 GO:0003735|GO:0005840|GO:0006412
Spst6g00783 265 MobiDBLite consensus disorder prediction 235 253 - -
Spst6g00783 265 Pfam Ribosomal protein S6e 18 144 IPR001377 GO:0003735|GO:0005840|GO:0006412
Spst6g00783 265 Coils Coil 205 232 - -
Spst6g00783 265 PIRSF RPS6e 17 265 IPR014401 GO:0003735|GO:0005840|GO:0006412
Spst6g00783 265 Gene3D - 149 250 - -
Spst6g00783 265 SMART Ribosomal_S6e_2 17 144 IPR001377 GO:0003735|GO:0005840|GO:0006412
Spst6g00783 265 MobiDBLite consensus disorder prediction 235 265 - -
Spst6g00783 265 PANTHER 40S RIBOSOMAL PROTEIN S6 18 256 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00783 Spst-Chr6 7086943 7089131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00783 17 265 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 71.084 2.58e-118 335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00610 3 9713793 9716253 Spst6g00783 6 7086943 7089131 PCT