Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00779 ATGGGAAAAGCCTTCGATGTGGGAGCCGTTCCTTTCAACTCCGACGGGTGGGGTCCGCCGGAAACTGCAACCGCTGGCAGCACGAGCAACCTCCCTCTCAATGTCCCCTTCGCCCCCTTTTCCCGTTCCGACAAATTGGGCCGCATCGCCGATTGGACCCGCAACTTCAACAACCCGACCCGCTCCAAGAATCCCGCCGACTCTGTCTTTGACTTCACCAATGACGACTCATTCCCGGCCTCCGCCGACGACGATGCCTCGTTCCGCCTCGTCGACGGAAAGCCTCCGCCGCGCCCCAAATTTGGCCCTAGGTGGCGTTTTCAGCAGCAGCGCCAGCTTCCGCAACGTCGCGATGAGGAGGTCGAGGCCCGAAAACGTGAACAGGAGAAGGAACGGGCTCGTCGTGATAGGCTGTACCATATGAACCGCTCAAACCCTAATGCTCCACGTCGCGAAGCCGCCGTTTTCAAATCCTCTGTTGATATTCAACCGGAGTGGAACATGCACGATCAGATCCCGTTTTCCACTTTCTCCAAACTCTCCTTCACCGTTCCCGAGCCTGAAGATCTTCTCCTCTGCGGCGCGCTCGAATACTATGATCGGTCTTACGATCGCATCACACCCAAAAACGAACGCCGCCTCGAACGGTTCAAGAATCGGAACTTCTTCAAAGTCACCACCACCGACGACCCTGTTATACGAAGACTCGCGAACGAGGACAAGGCCACGGTTTTTGCTACCGACACTATTCTCTCAACTCTTATGTGTGCCCCAAGGTCTGTTTATTCCTGGGACATTGTGGTTCAGCGTGTAGGGAACAAGCTTTTCTTCGATAAGCGTGATGGGTCGCAGCTTGATTTGCTTTCAGTTCATGAGACCTCTCAGGAGCCATTGCCTGAGGCTAAGGATGATATCAACTCTGCTCATTCTTTAAGCGTTGAGGCTGCTTATATTAACCAGAATTTCTCGCAACAGGTTTTGATTAGGGATGGGAACAAGGTTACTTTTGACGAGGCTAACCCTTTTGCTAATGAGGGTGAGGAAGTTGCTTCTGTGGCTTATAGGTATAGGAGGTGGAAGCTTGATGATGATATGTATCTTGTTGCGAGGTGTGAGGTGCACAGTGTGGTTGATGTGAATAAGCAGAGGTCGTTCCTTACTTTGAATGCCTTGAATGAGTTTGATCCTAAGTATTCTGGTGTGGATTGGAGGCAGAAGTTGGAGACTCAGAGGGGCGCTGTGTTGGCCACTGAACTTAAAAACAATGCGAATAAGTTGGCTAAGTGGACTGCTCAGGCTCTATTGGCTAGCGCCGATATGATGAAGTTGGGGTATGTGTCTAGAATTCATCCCCGTGATCATTTTAATCATGTGATTTTGGCCGTGGTAGGGTATAAGCCCAGGGATTTTGCAGCACAGATCAATTTGAATACTGCAAATATGTGGGGTATTGTGAAGTCTATTGTTGATTTGTGCATGAAGTTGAACGAGGGAAAATATGTTCTTGTGAAGGATCCATCCAAGCCGCAAGTTAGGATTTATGAGGTTCCCGCTGATGCGTTTGAAAATGACTATGTGGAGGAGCCACTTCCGGAGGAGGAACAAGTTCAGCCTCCGGCAGAGGGTACTGAGGGGGGAGAGGCTGCCACCACTAATGATGTGGAAGATAAACAGATAGACGTTCAAGCTTGA 1692 0.5053 MGKAFDVGAVPFNSDGWGPPETATAGSTSNLPLNVPFAPFSRSDKLGRIADWTRNFNNPTRSKNPADSVFDFTNDDSFPASADDDASFRLVDGKPPPRPKFGPRWRFQQQRQLPQRRDEEVEARKREQEKERARRDRLYHMNRSNPNAPRREAAVFKSSVDIQPEWNMHDQIPFSTFSKLSFTVPEPEDLLLCGALEYYDRSYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEANPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVHSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEEEQVQPPAEGTEGGEAATTNDVEDKQIDVQA 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00779 563 MobiDBLite consensus disorder prediction 54 136 - -
Spst6g00779 563 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 527 IPR007783 GO:0003743|GO:0005737|GO:0005852
Spst6g00779 563 MobiDBLite consensus disorder prediction 111 136 - -
Spst6g00779 563 MobiDBLite consensus disorder prediction 1 32 - -
Spst6g00779 563 Coils Coil 116 136 - -
Spst6g00779 563 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 7 515 IPR007783 GO:0003743|GO:0005737|GO:0005852
Spst6g00779 563 MobiDBLite consensus disorder prediction 54 75 - -
Spst6g00779 563 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 4 538 IPR007783 GO:0003743|GO:0005737|GO:0005852
Spst6g00779 563 PIRSF Transl_init_eIF3d 1 545 IPR007783 GO:0003743|GO:0005737|GO:0005852
Spst6g00779 563 MobiDBLite consensus disorder prediction 524 563 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00779 3 560 Eukaryotic Initiation Factors Gene Family AT4G20980 78.253 0.0 929
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00779 K03251 - gmx:100799613 1047.34