Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00773 ATGATCAGATACAAGCTGAAGCACACACACCGTCTTCAACCACTTCTATTATTGGTTTTCCTCTTTTTCAACTCCACATGGGCCATTGATTTCGTCTTCAACGGCTTCAACTCCTCTGAAGTGTTGCTCTTTGGCAACGCCACCGTTGATTCTCGAATTCTAACACTCACCCATAAGCAAACTTTCGCCATCGGTCGTGCCTTGTACAAAGAAAAAATTCCCACCAAGAAACCAAACTCTTCTTTTGTGTACCCTTTCTCCACCTCTTTCATCTTTGCCATGGCACCTTATGAAGACACTCTTCCAGGGCATGGCTTGGTTTTCATCTTTACACCTGTTACGGGCATCCAAGGCACAAGTTCTGCACAGAACCTTGGTCTGTTTAACCTCACTAATAACGGAGACTCAAACAACCACGTGCTTGGTGTTGAGTTCGATGTGTTCATGAACCAAGAATTCGATGACATCAACGCCAACCATGTGGGGATTGACATAAACTCTCTCAAGTCATTTGTTTCCAATGATTCTGGGTATTGGCAAGATGATGGTGACAAGTCCTTTAAGGAATTGACGCTTAACAATGGTGAGAATTACCAAGTTTGGATTGACTACGAAGATTCTTGGATGAATGTTACCATGGCACCGGTGGGTATGAAAAGACCTAGTAGGCCTTTGCTGAATGTTTCCCTCAATTTATCTCAGGTTTTTGAGGATGAAATGTTTGTTGGGTTTACTAGTGCCACTGGTCAATTAGTTCAGAGTCACAAGATTTTAGGTTGGAGTTTCAGCAATGAGAATGTTTCGTTGAGTGATGAACTTATTACTACTGGGTTACCGTCTTTTGTTCTTCCAAAGGATTCAATTTTTAAGTCCAAGGGGTTTGTTGCAGGGTTTAGTGTTGGAGTTTTCTTAGTTATTTGTGTCTTGGTTTTGTTGGCACTGATTTTGATTCAGAGGAAGCGTAGGAGAGAAAGGAAGAGGCAGGAAATGGAAGATTGGGAGTTGGAGTACTGGCCACACAGAATGGTGTATGAAGAAATTGAGGCAGCAACAAAGGGGTTTTCTGAGGACAATGTGATTGGGGTTGGTGGGAATGGGAAAGTCTACAGGGGTGTTTTAAGAGGAGGGGTGACTATTGCTGTGAAGCGCATTTCTCATGAAAATGATGGCGTGCGAGAATTTCTAGCCGAAGTTTCAAGCCTTGGGAGACTGAAACAAAGGAATTTGGTGGGGTTGAGAGGTTGGTGCAAGAAAGATGTTGGGAGTTTCTTGTTAGTCTATGACTACATGGAAAACGGTAGCTTGGACAAGAGGGTGTTTGATTGTGATGAGAGCAAGATGTTAAGTTATGAAGATAGGATAAGGATTGTGAAAGATGTGGCTTTTGCAGTTTTGTACTTGCACGAGGGGTGGGAAGCTAAGGTTGTGCATAGGGACATCAAGGCCAGCAATGTTTTACTTGATAAAGATATGAATGGAAGGCTTGGGGATTTTGGGTTAGCCAGAATGCACAGCCACGGTCAAGTTGCAAGCACCACAAAATTGGTTGGAACAGTGGGGTACATGGCTCCTGAAGTGTTCAAGACTGGAAGAGCTTCCACTCAGACAGATGTCTACATGTTTGGTATCTTGATTTTAGAGGTCTTTTGTGGAAGGAGACCTCTAGAAGAGGGTAAGCCACCTTTGGTGGAGTGGGTTTGGCAACTAATGGAACAAGGGCAAATTGTTTTTGCACTTGATGAAAGACTAAGGGCTAAGGGAGGGTTCAGTGAGCAAGAAATGGAGAGGGTAATGCACTTGGGTTTGTTGTGTGCCTACCCTGAACCAAAGGCCAGGCCCACAATGAGACAAGTGGTGAATGTTCTGGAGGGGAAGAACGAGGTTGATGATTCTGAAATTGAGAATATGGATAGTTATTTGCTCCAACAGTTGAAATCAAGGGATATACTGTCTGAGTATTCCCAATATTTTAGCTATGCCTCACACCCAACTTTTCAACAGATTCGTCACTCTTCCTCAATGTCTCTTACTTGGTCCAAATCTGTCGTCGAGGGTAGGTGA 2061 0.4347 MIRYKLKHTHRLQPLLLLVFLFFNSTWAIDFVFNGFNSSEVLLFGNATVDSRILTLTHKQTFAIGRALYKEKIPTKKPNSSFVYPFSTSFIFAMAPYEDTLPGHGLVFIFTPVTGIQGTSSAQNLGLFNLTNNGDSNNHVLGVEFDVFMNQEFDDINANHVGIDINSLKSFVSNDSGYWQDDGDKSFKELTLNNGENYQVWIDYEDSWMNVTMAPVGMKRPSRPLLNVSLNLSQVFEDEMFVGFTSATGQLVQSHKILGWSFSNENVSLSDELITTGLPSFVLPKDSIFKSKGFVAGFSVGVFLVICVLVLLALILIQRKRRRERKRQEMEDWELEYWPHRMVYEEIEAATKGFSEDNVIGVGGNGKVYRGVLRGGVTIAVKRISHENDGVREFLAEVSSLGRLKQRNLVGLRGWCKKDVGSFLLVYDYMENGSLDKRVFDCDESKMLSYEDRIRIVKDVAFAVLYLHEGWEAKVVHRDIKASNVLLDKDMNGRLGDFGLARMHSHGQVASTTKLVGTVGYMAPEVFKTGRASTQTDVYMFGILILEVFCGRRPLEEGKPPLVEWVWQLMEQGQIVFALDERLRAKGGFSEQEMERVMHLGLLCAYPEPKARPTMRQVVNVLEGKNEVDDSEIENMDSYLLQQLKSRDILSEYSQYFSYASHPTFQQIRHSSSMSLTWSKSVVEGR 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00773 686 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 316 429 - -
Spst6g00773 686 FunFam L-type lectin-domain containing receptor kinase S.4 430 635 - -
Spst6g00773 686 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Spst6g00773 686 CDD STKc_IRAK 360 624 - -
Spst6g00773 686 Gene3D Transferase(Phosphotransferase) domain 1 430 646 - -
Spst6g00773 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Spst6g00773 686 ProSiteProfiles Protein kinase domain profile. 354 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00773 686 Gene3D - 28 273 - -
Spst6g00773 686 SUPERFAMILY Protein kinase-like (PK-like) 330 625 IPR011009 -
Spst6g00773 686 SMART serkin_6 354 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00773 686 Coils Coil 316 336 - -
Spst6g00773 686 PANTHER - 47 626 - -
Spst6g00773 686 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 271 IPR013320 -
Spst6g00773 686 CDD lectin_legume_LecRK_Arcelin_ConA 29 263 IPR001220 GO:0030246
Spst6g00773 686 Gene3D Phosphorylase Kinase; domain 1 315 429 - -
Spst6g00773 686 FunFam L-type lectin-domain containing receptor kinase S.4 27 270 - -
Spst6g00773 686 Pfam Legume lectin domain 29 267 IPR001220 GO:0030246
Spst6g00773 686 Pfam Protein tyrosine and serine/threonine kinase 357 622 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00773 Spst-Chr6 6996314 6998374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00773 24 578 Receptor kinase-like Gene Family AT4G04960 67.679 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst6g00773 PK_Tyr_Ser-Thr 1.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00773 - - gmx:100804391 1212.59