Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00745 ATGACTTGTGGCTGCTTTGGAGCCAAATCTGTTAAGGAAAGACGCCCTTCTAATGTTCCTGGTGAAATTGATGGTTATCCCCTTGATAATGTTAAGCAATTTTCTGATAAAGAACTGAGATTGGCAACTGATGATTATCATTCAAGCAATCAGATAGGACGAGGAGGTTTTGGAACCGTTTACCAGGGAATCTTAAGAGATGGAAGGCGAATAGCAGTGAAGACTCTCTCAATTTGGTCAAAGCAGGGAGTTCGTGAATTTTTGACAGAAATTAAAACTTTGTCAAATGTTAAACATCCAAACCTTGTTGAATTGATTGGATTCTGCATCCAAGGACCTAGTCGTACATTAGTCTACGAGTATGTGGAAAATGGGAGTCTCAATAGTGCACTACTTGGCAAAAGGAATGAAAGCATTAAGCTAGACTGGAGAAAAAGATCTGCTATCTGTGTAGGTACTGCCAAGGGTCTTGCATTTCTACATGAAGAACTTTCACCACCAATTGTGCACAGAGACATCAAAGCTAGTAATGTACTACTTGACAAAAATTTCAACCCCAAAATCGGTGATTTTGGGTTGGCTAAATTATTTCCAGACGACATCACTCACGTTAGCACAAGAATTGCTGGAACAACTGGTTACTTAGCACCGGAATATGCAATAGGTGGGCAGTTAACCAAGAAGGCCGATATATACAGCTTTGGGGTTCTTATACTTGAAATAGTTAGTGGCAGAAGCAGCGCCAAAAGGACGAACGGAGGAGGAGGATCACACAAATTTCTCTTGGAATGGGCTTGGGAACTTTATGAGGAGAGAAAATTGTTGGAGTTTGTAGATCCTGACATGGAAGAGTTTCCTGAGGAAGAGGTAATGAGATACATGAAGGTTGCACTTTTCTGCACACAGTCAGCAGCAAGTAGAAGGCCTTTGATGATACAAGTTGTTGATATGCTATCCAAGGCAATCCAACTCAATGAGAAAGAACTTACAGCACCAGGATTCTTCACAGATGGAGAATCTTCTAGAAGGAACTCACGCCCCGTGGCTTCTACTACCTCTCATGTTGCTATTACTCAGGTCACCCCACGGTGA 1092 0.4176 MTCGCFGAKSVKERRPSNVPGEIDGYPLDNVKQFSDKELRLATDDYHSSNQIGRGGFGTVYQGILRDGRRIAVKTLSIWSKQGVREFLTEIKTLSNVKHPNLVELIGFCIQGPSRTLVYEYVENGSLNSALLGKRNESIKLDWRKRSAICVGTAKGLAFLHEELSPPIVHRDIKASNVLLDKNFNPKIGDFGLAKLFPDDITHVSTRIAGTTGYLAPEYAIGGQLTKKADIYSFGVLILEIVSGRSSAKRTNGGGGSHKFLLEWAWELYEERKLLEFVDPDMEEFPEEEVMRYMKVALFCTQSAASRRPLMIQVVDMLSKAIQLNEKELTAPGFFTDGESSRRNSRPVASTTSHVAITQVTPR 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00745 363 MobiDBLite consensus disorder prediction 333 363 - -
Spst6g00745 363 FunFam Putative LRR receptor-like serine/threonine-protein kinase 122 330 - -
Spst6g00745 363 FunFam cold-responsive protein kinase 1 17 121 - -
Spst6g00745 363 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 345 - -
Spst6g00745 363 SUPERFAMILY Protein kinase-like (PK-like) 25 318 IPR011009 -
Spst6g00745 363 Gene3D Transferase(Phosphotransferase) domain 1 122 331 - -
Spst6g00745 363 SMART serkin_6 46 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00745 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Spst6g00745 363 CDD STKc_IRAK 52 320 - -
Spst6g00745 363 Gene3D Phosphorylase Kinase; domain 1 13 121 - -
Spst6g00745 363 Pfam Protein kinase domain 46 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00745 363 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Spst6g00745 363 MobiDBLite consensus disorder prediction 337 363 - -
Spst6g00745 363 ProSiteProfiles Protein kinase domain profile. 46 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00745 Spst-Chr6 6741693 6744307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00745 34 337 Receptor kinase-like Gene Family AT1G56120 52.303 4.40e-103 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst6g00745 Pkinase 3.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00745 - - gmx:100809588 652.129