Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00720 ATGGTGGACCCCTATTTTGAGCTTCCCCAACTTCAGTATATAGCTTTTGTGCCTTCAATCTTGGAAGTTAACTCCATTGTGAAAATGGGCAGCATGAAATTGGAGTTGCATGTTGGGCTTTTTGTCACCTGCATGGTGATTCTCGCAGGGGCTTTCTGTGTTGGAGATACTGACATGGTTGATGTTGCTGCAATGAATAGTCTATATGTTTCTCTGGGGTCACCACCACTTCAAGGGTGGAAATCCATGGGAGGAGATCCATGTTTAGAACTGTGGCAAGGAGTCGCTTGTGTCTTCTCCAACATAACTGCAATACACCTCGGAGGCATGAATTTGGGTGGACAGCTGGGCAGCAATTTGAATTTCCCATCCATTTTAGAATTGGATCTTAGCAACAACCACATTGAAGGGCCTATTCCATTTACTTTGCCCCCTACTCTGAGGAGCTTGTCTCTATCAGGAAATCGGTTAAATGGAAGCATTCCAGATGCCTTGTCCTTATTAACTCAGTTGTCAAACTTGGACTTGTCAAATAACAACTTGAGTGGTCAGTTGCCTTCCTCAACAGGGAGCTTATCATCGCTTACCACATTGCACTTGCAAAATAATCAACTTTCTGGGACCCTCTATGTTTTGCAAGACCTGCCTCTTCAAGATCTGGATATAGAGAACAATTTATTCTCTGGACCAATTCCTCCAAAATTGTTGTCTATCCCTAATTTCAGTAAAAATGGGAATCCGTTTAATACTACTATTATTCCATCACCCCCTCTTGCGGCCCCTGCACCCGCAGCTATGGTTCCATCCCCCCAAGAATCACCTTGGAAAGTGGCATATGGTCCTTCTGCCCTGACAGTACCAGTGCCTGCAAGGACTAGGAAGTCTTTTATAGCTAAGATCATCATCTGGATTGCTGGTGCAGGTCTTTTTATATTTATTGTATTGGGAGTTTGTCTTTTAATGTTGTGCTGCATTAAGAGAAGGCCGGAGAAGAAAAATGCTGAGAAACTTGATGACGTGGGTGTGTTTGCGGGTCCTTTGAATAAACATAAATGCAGTGATTCTGTTTTTGAAGCAACTAATCAAGAGGAGAAAGGTAAACGTGAAGTACCAAATAGAAGTGCAAATTTGATTCCTAAGGTTCAGAATGAACAAGAGATATATGTGAAAGTACAATCTGCAACTTCAGAATGGAATAATGGTCATCAATCAATGAACAATGGAGGGGGTTCCAAACTTTCACCCCTGCAACCACCACCAAAACACTCTTTCCCAACCATTTGTGGTGAGAAGATCACTATCAATCCAGCTATAACTACAAAAGAAACTGGAAAACAAGTTATGAAAAATTCTATCGAAGTTTATACTGTTGCGTTGCTTCAACAATATACAAATAGCTTTTCCCGAGAAAATTGTATTGGGGAAGGCACACTCGGGCCTGTTTATCGGGCTGAACTCCCTGATGGAAAGCTATTGGCAGTGAGGAAACTGGATGCTACTGCTTCCATGGGGCAGAGTCATGAGCAATTTCTTCAATTGGTATCCATCATCTCAGATATTCAGCATGCAAATATTGCAAGGCTTGTAGGCTACTGTCTTGAACATAGCCAGCGACTACTTGTATATGAGTATTGTAGTAATAGGACCCTACATGATGTACTGCATGGGGATGATGATCAGCGAATCAAACTTCCATGGAATGCACGCATTCGGGTGGCACTTGGAGCTGCAAGAGCTGTCGAGTATCTGCATGAGAACTTTCGGCCACCTATTGTGCATCGAAATTTTAGGTCTGCTAATATTCTTCTGAATGACAATTTGGAAGTGTGTGTCTCTGATTGTGGATTAGGGCCATTATTATCTTCTGGCTCTACGGGTCAGTTATCAGGACGCCTCCTTACAGCTTATGGTTACAGCGCTCCAGAATTCGAGTCTGGAAGTTATACGCAGCAAAGTGATGTCTTCAGTTTTGGTGTTGTAATGCTAGAACTCCTCACTGGACGAAAATCCCATGACAAGTCCCGGCCTCGTGCGGAGCAATTTTTGGTTAGATGGGCTGTCCCTCAACTCCATGACATTGATACATTGTCAAAAATGGTTGACCCCTGCTTAAGCGGTACCTATCCTATGAAGTCCTTGTCGCGCTTTGCAGATATTGTTTCTTCATGTCTACAGCGTGAACCTGAATTCCGACCTGCAATGTCAGAAATTGTTCAAGATCTCTTGCGAATGATGTAA 2238 0.4298 MVDPYFELPQLQYIAFVPSILEVNSIVKMGSMKLELHVGLFVTCMVILAGAFCVGDTDMVDVAAMNSLYVSLGSPPLQGWKSMGGDPCLELWQGVACVFSNITAIHLGGMNLGGQLGSNLNFPSILELDLSNNHIEGPIPFTLPPTLRSLSLSGNRLNGSIPDALSLLTQLSNLDLSNNNLSGQLPSSTGSLSSLTTLHLQNNQLSGTLYVLQDLPLQDLDIENNLFSGPIPPKLLSIPNFSKNGNPFNTTIIPSPPLAAPAPAAMVPSPQESPWKVAYGPSALTVPVPARTRKSFIAKIIIWIAGAGLFIFIVLGVCLLMLCCIKRRPEKKNAEKLDDVGVFAGPLNKHKCSDSVFEATNQEEKGKREVPNRSANLIPKVQNEQEIYVKVQSATSEWNNGHQSMNNGGGSKLSPLQPPPKHSFPTICGEKITINPAITTKETGKQVMKNSIEVYTVALLQQYTNSFSRENCIGEGTLGPVYRAELPDGKLLAVRKLDATASMGQSHEQFLQLVSIISDIQHANIARLVGYCLEHSQRLLVYEYCSNRTLHDVLHGDDDQRIKLPWNARIRVALGAARAVEYLHENFRPPIVHRNFRSANILLNDNLEVCVSDCGLGPLLSSGSTGQLSGRLLTAYGYSAPEFESGSYTQQSDVFSFGVVMLELLTGRKSHDKSRPRAEQFLVRWAVPQLHDIDTLSKMVDPCLSGTYPMKSLSRFADIVSSCLQREPEFRPAMSEIVQDLLRMM 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00720 745 ProSiteProfiles Protein kinase domain profile. 467 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00720 745 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 545 745 - -
Spst6g00720 745 Gene3D Phosphorylase Kinase; domain 1 431 544 - -
Spst6g00720 745 SUPERFAMILY L domain-like 61 239 - -
Spst6g00720 745 ProSiteProfiles Leucine-rich repeat profile. 146 168 IPR001611 GO:0005515
Spst6g00720 745 SUPERFAMILY Protein kinase-like (PK-like) 450 741 IPR011009 -
Spst6g00720 745 Gene3D Ribonuclease Inhibitor 61 256 IPR032675 -
Spst6g00720 745 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 48 743 IPR046959 -
Spst6g00720 745 PRINTS Leucine-rich repeat signature 171 184 - -
Spst6g00720 745 PRINTS Leucine-rich repeat signature 192 205 - -
Spst6g00720 745 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 170 259 - -
Spst6g00720 745 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 58 169 - -
Spst6g00720 745 Pfam Protein tyrosine and serine/threonine kinase 470 741 IPR001245 GO:0004672|GO:0006468
Spst6g00720 745 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 434 544 - -
Spst6g00720 745 Gene3D Transferase(Phosphotransferase) domain 1 545 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00720 Spst-Chr6 6516155 6522890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00720 51 745 Strubbelig Receptor Gene Family AT4G03390 50.738 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Spst6g00720 PK_Tyr_Ser-Thr 1.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00720 - - gmx:100793423 1150.96