Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00703 ATGAACAGTAGTGATCAGGCCGCACCAACCGTTGCGGGTGTGGATTCGGTGGGGTTCAGAGCCGCTATGGCTTCGGCTTCGTCTTCTTCGTCCAAACTGTGCTTCAATTCGGACTGCAAAGAATTGAAGGCCGAAAGACCTAAGAAAGGTTGGAGACTCCGGAGTGGAGAACTAGCTGAACTTTGTGATCGATGCGGGTTATGGATGTTCGCTGGTGGAGCTTATTCGTTGTTTTTTCCAGTGATGGCTTTTGAAGCAATTATTATTTACATGAAGATTTTCAATTTGTGTAAGGGAGGTTCTGTGAGATTTTTCACTCAAATGCTTCTGGTTGGAGGAGTTGTGAAACTTGTAGAAAGCAAATCTGAAAAGTACCAGCTCATCAAGAAACTTAGAGACCTATCTGCCAAAGGTTGGAATCAGTTGGCTGGATCAGGTCCTGTACCATGGAAGCAAGCGCCAAGTCTGTTCAATTCTGCTTCTTCATCTGACCTGATCCCAGATGTGCCTTCTTTAGCTGAATTATCCAATAGCTTTGACAAAATGTATTGCAATGAAAGGTTACCTGCCTCAGCCTTGGAAAAGAAAAGTGAGGATTTTTCTGGATTACCAGTTCATTGGAACGTCACCATTTGCCCACGAGAGATGAAGCTCATGAATGGAATGAGGAATGAGGACAAAGCAAGTTCATGTTTAACTATGTGTCAGCAACCTCCTTCTCAGAAGGAAGAGTCATCTCCTCAACCATTTGGTTTGCCTGTGCCTAATTCATGCCAAAATGAAAGAAATGGTCAACTTGGGGTAACTGGAAGTCATCCACAACAGACTCCACCACCTCCAGTAAAGCAATTTAATGGCACTATGCACTTAACACCTGACTCATCAGGTGAGGCTCAGGTTCGCAATGGGCGGCCTCGAGCAGATGCCCGAGGAAGAAACCAGTTACTGCCACGGTACTGGCCCCGCTGTACTGATCTGGAACTACAACAAATATCCATAGATGCTAGTGATGCTGGACGAATTGGGCGTTTAGTGCTACCCAAAAAGTGTGCTGAGGTTGGTCTTGAGATTCTTCAAGCTTCACGTGGGACATACTTCCCACCAATTTCTCAGCCTGAAGGATTGCCACTTAAAATCCTAGACGCAAAGGGAAAGGAATGGATATTTCAATTTCGCTTCTGGCCAAACAATAACAGCAGAATGTATGTTTTAGAGGGTGTCACTCCATGCATACAGTCCATGCAGTTACAGGCTGGTGACACTGGTAAGGCATTGTCACGAAGCCGGTTGGAGCCTGAGGGGAGGTTGGTTATGGGATTTAGAAAGGCTTCAAGTGCTGTGCCATCCGACCAGGACAATGAAACCAACAAGACTGGAAATGGATTTTCTGCACATGGTGAAGTTGAATTGGCTGATCCTAATTCATGGTCTAAAGTTGACAAGTCAGGATACATAGCAAAGGAAGCACTGGGGAGCAAATCATTAATATCTAGAAAACGAAAGAGCGGCATGTTGGGCTCAAAGAGTAAACGTCTAAGAGTTGAAAATGAGGATTTAATAGAGCTGAAGATTACATGGCAGGAAGCTCAAGGTCTGCTTCGCCCTCCTCCTAGCCTCGTTCCGAGCATTGTTGTGATTGAAGGTTTTGAATTTGAGGAATATGAGGAAGCTCCAGTGCTTGGGAAGCCAACAATTTTTACCAGTGATAATGTGGGTGAAAAGATCCAGTGGGCTCAGTGTGAAGATTGTCTTAAGTGGCGCAAATTACCAGCAAGTGCACTTCTTCCATCAAAATGGACGTGTTCTGATAATTCGTGGGATCCGGAAAGATCTTCTTGTTCAGTTGCACAAGAGCTGACAGCAGAGCAACTTGAGAATTTGCTACCTCCTTGTAATTCAGCTGTTCCCAAGAAAATGAAGGCCACCAAACAGGATCCTGATAATGCTGAAGCATTGGAGGGACTTGACACCCTCGCGAATTTAGCTATCCTGGGAGAGGGTGAGGCACTCCCAGCATCCGCCCAGGCCACGACTAAACACCCACGCCACAGACCTGGCTGTTCTTGCATTGTTTGCATTCAACCTCCCAGTGGAAAGGGTCCCAAGCATAAGCAGACATGTACTTGTAATGTATGCTTAACAGTGAAGAGACGTTTCCGGACCCTTATGTTACGGCGTGAGAAGAAGCAATCAGAAAAAGAAGCTGAGACAACTCGTAAGAAGCAACAGCAACAACATCCTCAACCATTACCTTCGGCTGAAATTTTGTTTGACGAGGATTCATTACCCTGTAGTAACACTGGTGATAGTAGCCCGAACCAGAACAAAGAGGGTAATGATGGTTCTGATGATGATCCTAACAGAATAAAATCATCTGCTTCGCCATTCAAAGGCCAAATTGACCTCAATATCCAGCCAGAGCGTGAAGAAGAATTATCACCTGGTTCAGATTCTGGTGGCATGATGAAGTTGCTCCATGATGCTACTGAGAGGTATCTGAAGCAGCAGACCGTGAACTCCGGCACTGGAGATTCTTCAGGCAGTCAGTCACAGCTGGTAGGAGATGCAATGAGGGAAGATAAACTTAGCAATGGTGTTACCCATGGAAGTAGTAGTCATAGTACTGATAAGGAACATGCCCAATCTTTGTCTATGAATGTGTGA 2664 0.4535 MNSSDQAAPTVAGVDSVGFRAAMASASSSSSKLCFNSDCKELKAERPKKGWRLRSGELAELCDRCGLWMFAGGAYSLFFPVMAFEAIIIYMKIFNLCKGGSVRFFTQMLLVGGVVKLVESKSEKYQLIKKLRDLSAKGWNQLAGSGPVPWKQAPSLFNSASSSDLIPDVPSLAELSNSFDKMYCNERLPASALEKKSEDFSGLPVHWNVTICPREMKLMNGMRNEDKASSCLTMCQQPPSQKEESSPQPFGLPVPNSCQNERNGQLGVTGSHPQQTPPPPVKQFNGTMHLTPDSSGEAQVRNGRPRADARGRNQLLPRYWPRCTDLELQQISIDASDAGRIGRLVLPKKCAEVGLEILQASRGTYFPPISQPEGLPLKILDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTGKALSRSRLEPEGRLVMGFRKASSAVPSDQDNETNKTGNGFSAHGEVELADPNSWSKVDKSGYIAKEALGSKSLISRKRKSGMLGSKSKRLRVENEDLIELKITWQEAQGLLRPPPSLVPSIVVIEGFEFEEYEEAPVLGKPTIFTSDNVGEKIQWAQCEDCLKWRKLPASALLPSKWTCSDNSWDPERSSCSVAQELTAEQLENLLPPCNSAVPKKMKATKQDPDNAEALEGLDTLANLAILGEGEALPASAQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCLTVKRRFRTLMLRREKKQSEKEAETTRKKQQQQHPQPLPSAEILFDEDSLPCSNTGDSSPNQNKEGNDGSDDDPNRIKSSASPFKGQIDLNIQPEREEELSPGSDSGGMMKLLHDATERYLKQQTVNSGTGDSSGSQSQLVGDAMREDKLSNGVTHGSSSHSTDKEHAQSLSMNV 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00703 887 Pfam CW-type Zinc Finger 576 618 IPR011124 GO:0008270
Spst6g00703 887 Coils Coil 725 745 - -
Spst6g00703 887 MobiDBLite consensus disorder prediction 230 308 - -
Spst6g00703 887 MobiDBLite consensus disorder prediction 725 741 - -
Spst6g00703 887 CDD B3_DNA 335 421 IPR003340 GO:0003677
Spst6g00703 887 MobiDBLite consensus disorder prediction 864 887 - -
Spst6g00703 887 MobiDBLite consensus disorder prediction 442 467 - -
Spst6g00703 887 Coils Coil 881 887 - -
Spst6g00703 887 SMART B3_2 329 444 IPR003340 GO:0003677
Spst6g00703 887 MobiDBLite consensus disorder prediction 230 272 - -
Spst6g00703 887 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 123 846 - -
Spst6g00703 887 Gene3D - 321 447 IPR015300 -
Spst6g00703 887 MobiDBLite consensus disorder prediction 763 777 - -
Spst6g00703 887 ProSiteProfiles Zinc finger CW-type profile. 571 621 IPR011124 GO:0008270
Spst6g00703 887 SUPERFAMILY DNA-binding pseudobarrel domain 332 421 IPR015300 -
Spst6g00703 887 MobiDBLite consensus disorder prediction 446 462 - -
Spst6g00703 887 MobiDBLite consensus disorder prediction 832 853 - -
Spst6g00703 887 Gene3D - 575 628 - -
Spst6g00703 887 MobiDBLite consensus disorder prediction 725 887 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00703 Spst-Chr6 6366703 6378288 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00703 30 878 B3 DNA Binding Superfamily AT4G32010 37.982 3.01e-153 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00703 K09287 - gmx:100782114 1421.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00703 6 6366703 6378288 Spst6g00703 6 6366703 6378288 ECH