Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00700 ATGCAGACGAGGTACATGGAGAGATCGAGCAGCGCCGCCAGGGAGAAGCGCAGTTTAGATTCAGGTTCCACCGAGGAAGATCAACCTGAAAAAAAGCGACCTGCTCTTGCTAGTGTAATTGTTGAAGCCCTCAAGTTGGATAGTCTACAGAAACTATGTTCATCATTGGAGCCTATTCTTCGTAGAGTGGTTAGCGAAGAAGTAGAGTGTGCTTTAGCAAAATTAGTCCCTGCCAAGCTTAGTGGGAGGTCTTCTCCCAAGAGCATAGAAGGCCCTGATGACAGTAGTCTACAATTACAATTCAGGAACAGGTTATCCCTTCCCCTCTTTACTGGTGGGAGAGTGGAGGGAGAGCATGGCAGCGCTATACACATCGTTTTGATTGATATAATAACAGGCCATGTTGTCACATCTGGCCCAGCTTCATGTGTCAAACTAGATGTTATTGTACTTGAAGGAGATTTCAATAACGAGGATGATGAGAATTGGAGTGAAGAAGATTTTGATAGTCACGTAGTTAAAGAGCGAGAAGGAAAGAGACCTCTTCTGGCTGGTGATCTGCAAGTGACACTGAAGGAGGGTGTAGGGACACTGGGTGAGCTTACATTTACAGACAACTCTAGTTGGATAAGGAGTAGGAAGTTCAGGCTGGGGCTCAAAGTTTCCTCAGGTTGTTATGAGGGAACGCGTATTCGTGAAGCCAAAACAGAGGCTTTCACTGTTAAGGATCATCGTGGAGAACTATACAAGAAGCACTACCCACCTTCCTTGAATGACGAGGTCTGGAGACTGGAGAAGATCGGCAAGGATGGTTCATTTCACAAAAGGCTAAATAAAGCAGGAATATATACAGTTGAAGATGTCGTACGACTTGTGGTCAGAGATCCACAGAGATTGCGGAATATTCTTGGGAGTGGTATGTCAAATAAAATGTGGGATGTTCTTGTTGAGCATGCAAAGACTTGTGTTCTCAGTGGAAAACTCTATGTGTACTATCCCGATGATTCAAGGAATGTTGGTGTTGTTTTCAATAACATCTATGAGTTGAGTGGTCTAATTACCAATGACCAATATTACTCTGCTGATTCTCTCTCTGGCAGTCAAAAGGTTTATGTGGACACATTGGTGAAGAAGGCATATGAGAATTGGATGCACGTTATTGAGTATGATGGCAAGTCTCTGCTAAATCACAATCAGAATAAGACTTTGGGCACCTCCCAACCTCTGGCTCCAGTGGGCTCCCATGATTATTCAATTTCAAACTCACTTGATCAGCAGACCTCCATCCCAAGTCTACCAATTCCTGTAACTACTGGGCAGCCTTCAATGGATCCAGCCGTAACAGTCGGAGGTTATCATAATGTCGCGACTACCAGATGCTCAATGCATCCACAGAATGATAATTTTCATTCTTCTATTGAGTTTGATAACACTGCATTCCCACTGCAAAACCAACTAATGAATGGTTCACTCCAATGTCAACTTCCTACAAATGAAAATGGGCTGACTCTTGGTTCACGACAATCAGCTACTCCTGGCTTTCAGAATGTCAGCATTTCGAATCCTACTTATAGAGGACTTGAAGACTACATCCCAGAGGAGGAGATTCGATCTAGAAGTCATGAGATGCTGGAAAATGAAGATATGCAGCATCTGCTTCGTATATTTAATATGGGAGGAGGGCAATCTCATGCTTCCTTTAATAATCCAGAAGATGCATACCCTCCTTATTCATCTACTTATATGCCTGCGACCTCCGTGAGCTACAACTTAGATGATGAACGAAACCGTTCCTCAGGAAAGGCTGTTGTGGGCTGGCTTAAGCTTAAAGCAGCTTTGAGATGGGGCATTTTTATTAGGAAGAGGGCCGCTGAGAGACGGGCACAACTTGTTGAGTTGGATGACACATAG 1911 0.439 MQTRYMERSSSAAREKRSLDSGSTEEDQPEKKRPALASVIVEALKLDSLQKLCSSLEPILRRVVSEEVECALAKLVPAKLSGRSSPKSIEGPDDSSLQLQFRNRLSLPLFTGGRVEGEHGSAIHIVLIDIITGHVVTSGPASCVKLDVIVLEGDFNNEDDENWSEEDFDSHVVKEREGKRPLLAGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVSSGCYEGTRIREAKTEAFTVKDHRGELYKKHYPPSLNDEVWRLEKIGKDGSFHKRLNKAGIYTVEDVVRLVVRDPQRLRNILGSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDDSRNVGVVFNNIYELSGLITNDQYYSADSLSGSQKVYVDTLVKKAYENWMHVIEYDGKSLLNHNQNKTLGTSQPLAPVGSHDYSISNSLDQQTSIPSLPIPVTTGQPSMDPAVTVGGYHNVATTRCSMHPQNDNFHSSIEFDNTAFPLQNQLMNGSLQCQLPTNENGLTLGSRQSATPGFQNVSISNPTYRGLEDYIPEEEIRSRSHEMLENEDMQHLLRIFNMGGGQSHASFNNPEDAYPPYSSTYMPATSVSYNLDDERNRSSGKAVVGWLKLKAALRWGIFIRKRAAERRAQLVELDDT 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00700 636 Pfam Calmodulin binding protein central domain 256 322 IPR046830 -
Spst6g00700 636 MobiDBLite consensus disorder prediction 1 34 - -
Spst6g00700 636 PANTHER OS02G0177800 PROTEIN 15 549 IPR012416 GO:0005516
Spst6g00700 636 MobiDBLite consensus disorder prediction 9 33 - -
Spst6g00700 636 Pfam Calmodulin binding protein-like N-terminal domain 97 244 IPR046831 -
Spst6g00700 636 Pfam Calmodulin binding protein C-terminal domain 327 389 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00700 Spst-Chr6 6306844 6311473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00700 14 631 Calmodulin-binding Proteins AT5G57580 60.062 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00700 - - gmx:100802994 1159.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00523 3 8697404 8703420 Spst6g00700 6 6306844 6311473 PCT