Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00696 ATGTCTAGTGTTACTTACTTGCAACGTTTCTCTAGCGCTTTCCGTGAAAACCAGTCGCATCTAAAGCTTGTACTTCTTTGCACCGTCGTAAGTGGTGGTGGTCTTTTGGCTTATGGTGAGAATGCTGCACCTGAGGAGGCAGTTACCGAGAAGAAAAAGGTGGTGGTGCTGGGAACTGGTTGGGCTGCCACAAGTTTCTTGAAGAATCTGAACAATCCGAAATATGAGGTTCAAGTAGTTTCGCCACGTAACTACTTTGCTTTCACTCCTTTGTTGCCTAGCGTTACGTGCGGGACCGTCGAAGCACGCAGCATTGTTGAACCAGTTCGCAACATTTTTAAGCAGAAAAAAGTGGACGTACAATTCAGTGAAGCAGAATGTTTCAAGATTGATGCAGAAAATAGGAAAGTTTACTGTCGATCTAGTTTGAACAATAATTTGAATGGGAAAGAAGAATTTGTCGTGGATTATGACTACTTAATAATCGCGGTGGGCGCTAATGTGAACACATTTAACACTCCAGGAGTGACAGAGAATTGCCATTTTCTCAAAGAAGTTGAAGATGCTCAAAAGATTAGAAGATCAGTTATTGACTGCTTCGAGAGAGCAAATTTGCCCGATATAAGTGAAGATGAGAAGAAAAGAATTCTTCATTTTGCTATTGTTGGAGGTGGACCAACTGGAGTGGAGTTTGCAGCCTCACTTCATGATTTTGTCAATGAGGATTTGGTCCGTTTATATCCTGGGATAAAAGATCTGGTTAAAATTACTCTTCTGGAGGCTGCAGATCATATATTGGGCATGTTTGACAAGCGAATCACTGTTTTTGCTGAAGACAAGTTTCGGAGAGATGGGATCGATGTGAAAACAGGATCCATGGTTGTTAAGGTATCTGAGAAGGAAATTTCTACTAAAGAACTGAAAAATGGAGAGATTAAGACAATTCCGTATGGAATGGCTGTCTGGTCAACTGGTATTGGCACTCGTCCATTTATTAAAGATTTTATGACTCAAATCGGTCAGGCTAGCAGGCGTGCTCTAGCTACTGACGAATGGTTGAGAGTTGAAGGGTGCAACAATGTGTATGCGCTCGGTGATTGTGCTACGATAAACCAACGAAAAGTCATGGAAGATATTGCAGCGATCTTTAAGAAGGCCGACAAAGATAATTCAGGAACACTCACGGTCAAAGAATTTCAAGAGGTCATGAAAGACATCAGTGAAAGATACCCTCAGGTTGAGCTATATCTGAAGAATAAACAGATGGGCAATATTGCTGATTTATTGAAGGAAGCCAAGGGGGGTGATAAAAATAAATCGAGTGAACTGAATATCGAAGAACTTAAAACAGCACTTTCCAAAGTGGATTCTCAAATGAAATTTCTTCCTGCTACAGCCCAGGTTGCATCTCAGCAAGGCACTTACCTGGCCAAGTGTTTTAACCGGATGGAAGAGAGTGAAAAAAATCCAGAGGGTCCACTCAGGTTCAGGGGAGAAGGTCGCCATCGGTTCAAACCCTTTAGGTACAAGCATTTAGGTCAATTCGCTCCTTTGGGAGGAGAGCAGACAGCAGCCCAGCTTCCTGGTGATTGGGTTTCAATTGGTCATAGCAGTCAATGGCTGTGGTATTCTGTATATGCAAGCAAGCAAGTAAGCTGGCGTACAAGAGCATTGGTGGTTTCAGATTGGACAAGACGTTTTATTTTTGGAAGGGACTCGACCGAACTGGAACAGCCAAGACACGCCAGCAATTTTCAACCTCAGGTTGAATACTCCCCTGTTTTGAAGTAG 1791 0.4266 MSSVTYLQRFSSAFRENQSHLKLVLLCTVVSGGGLLAYGENAAPEEAVTEKKKVVVLGTGWAATSFLKNLNNPKYEVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIFKQKKVDVQFSEAECFKIDAENRKVYCRSSLNNNLNGKEEFVVDYDYLIIAVGANVNTFNTPGVTENCHFLKEVEDAQKIRRSVIDCFERANLPDISEDEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLVRLYPGIKDLVKITLLEAADHILGMFDKRITVFAEDKFRRDGIDVKTGSMVVKVSEKEISTKELKNGEIKTIPYGMAVWSTGIGTRPFIKDFMTQIGQASRRALATDEWLRVEGCNNVYALGDCATINQRKVMEDIAAIFKKADKDNSGTLTVKEFQEVMKDISERYPQVELYLKNKQMGNIADLLKEAKGGDKNKSSELNIEELKTALSKVDSQMKFLPATAQVASQQGTYLAKCFNRMEESEKNPEGPLRFRGEGRHRFKPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVSDWTRRFIFGRDSTELEQPRHASNFQPQVEYSPVLK 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00696 596 SUPERFAMILY FAD/NAD(P)-binding domain 218 371 IPR036188 -
Spst6g00696 596 PRINTS FAD-dependent pyridine nucleotide reductase signature 218 236 - -
Spst6g00696 596 PRINTS FAD-dependent pyridine nucleotide reductase signature 157 175 - -
Spst6g00696 596 SMART efh_1 378 406 IPR002048 GO:0005509
Spst6g00696 596 SMART efh_1 427 455 IPR002048 GO:0005509
Spst6g00696 596 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 420 575 - -
Spst6g00696 596 Coils Coil 438 458 - -
Spst6g00696 596 CDD EFh 378 453 IPR002048 GO:0005509
Spst6g00696 596 ProSitePatterns EF-hand calcium-binding domain. 387 399 IPR018247 -
Spst6g00696 596 Pfam EF hand 379 405 IPR002048 GO:0005509
Spst6g00696 596 PANTHER NADH DEHYDROGENASE 44 574 IPR045024 GO:0003954|GO:0006116
Spst6g00696 596 Gene3D - 422 576 - -
Spst6g00696 596 Gene3D - 43 421 - -
Spst6g00696 596 ProSiteProfiles EF-hand calcium-binding domain profile. 374 409 IPR002048 GO:0005509
Spst6g00696 596 Pfam Pyridine nucleotide-disulphide oxidoreductase 52 376 IPR023753 GO:0016491
Spst6g00696 596 SUPERFAMILY FAD/NAD(P)-binding domain 51 270 IPR036188 -
Spst6g00696 596 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 42 403 - -
Spst6g00696 596 SUPERFAMILY EF-hand 367 463 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00696 Spst-Chr6 6270432 6276397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00696 1 576 Chloroplast and Mitochondria Gene Families AT4G21490 73.928 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00696 K03885 - gmx:100797657 1089.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00512 3 8580678 8585319 Spst6g00696 6 6270432 6276397 PCT