Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00694 ATGGGTGACCAACAACAGTCCACCACCGCCGGCTCCGTTCTCCGGCGAGTCGTGGCGCTCATTTCTTCCCTGATCACCCTCTCCCTCTCCATCAGGGTCTTTGCTGGAAAGTGGCAACTCATTCGGATCAGGCTGGAGGAGCTCAACTCGGCACTCGTCGCCGGCGACGCCACTTCACTTTCCGGCGAGCTACCGGCGATAACGGCTACGGTGGAGGAGTGCCACGAGCTGGCACGGCGGTGTGTGGATCTGTCTTACAGCGGGAAGCTCTTGATGCAGAGCGACTTGGACGTGACGTTGGGGAAGTTGGAAGCGCACGTGAAGAAGCTGTCTGAGATATTCAAGAAGCGAGTATCGATGCATGGCTACGCTGTTGTGGTTTCAAGGCCTGGTTTTGGAGCTTGCAAAGATGACATGAGATTCTACTTAAGGGACTTAATGACTCGAATGAAGGTTGGTGATCTGGGTATGCGGAAGCAAGCATTGATGAACCTGCATGATGTTGTTGTGGAGGATGATAAGTATGTGAAATTGGTTGTTGAAGTTTCTGAGTTTGTTCACGTGTTGGTGGATTTTCTGGGTTGTAACGAGGTTGAGGTTGTTGAAGAGGCTGCCAAGGTTGTTTCTGTGGTTGCGGGGTTTGATTCTTATAAAGGGGTTTTGGTTGGTGCTGGGGTTATTGCGCCATTGATTCGGATTTTGGAATGTGGGAGTGAAGTGGGAAAGGTTGGTGCTGCAAGGTGTTTGCATAGGTTGACTGAGAATTCGGATAATGCGTGGTGTGTTTCGGCTCATGGGGGTGTCACTGTCTTGTTGAGGATTTGTGAGAGTGTAGAGTGTAAAGGGGAATTGGTTAGTCCTGCTTGTGGGGTGTTGGGGAATCTTTGTGGGGTTGAGGAAATCAAGAGGTTTATGGTTGAGGAGGGCGTTGTTTCCACGTTTGTGAAGCTTGTGAGGTCTAAGAATGAAGCAATTCAGGTTAGTTCTGTTGAGTTGATTCAAAACATCGCCTCTGGTGATGAGTTGGTTAGGCAGATGGTGGTTAGGGAGGGAGGGGTTCGTGTTCTTTTGCGTGTTTTGGATCCAAAGTGGACGTGCTCATCTAAAACAAGAGAGGTTGTGATGAGGGCTATTCAGAATTTGTGTTTTTCTTCGTCTAGTTGTGTTACTCTTTTGCTGAGTCATGGCTTTGTGGATCAGTTGATGTATTATATTCGAAGTGGGGAGGTATCGATTCAGGAGTTGGGGCTGAAGGTAGCGTTTAGATTGTGTGAAGCATCGGATGAGGCCAAGAAGGCATTAGGTGATGCCGGCTTCATGGCTGAGCTGGTGAAGTTTCTAAATGCGAAATCGTTCGAAGTTCGTGAAATGGCAGCAGAGGCACTCTCTGGCATGGTGATGGTGGCTAAAAATAGGAAGAGGTTTGTGCAGGATGACCAAAACATTGCCCTTCTTCTGCAATTGCTGGATCCAGGGGAGGGAAATTCTGGTAATAAAACGTTGTTGATCTCTATCTTGATGTCACTAACAAGTTGCAACAGTGGGAGGAAAAAAATCGTGAGTTCCGGGTATGCCAAAAACATAGAGAGGCTTGCAGAAGCTGAGGTTTCTTCTGATGCCAAGAGGCTCGTCAGGAAGCTATCCACAAACCGGTTCCGCAGTATGTTGAGTGGAATCTGGCACTCTTGA 1689 0.4855 MGDQQQSTTAGSVLRRVVALISSLITLSLSIRVFAGKWQLIRIRLEELNSALVAGDATSLSGELPAITATVEECHELARRCVDLSYSGKLLMQSDLDVTLGKLEAHVKKLSEIFKKRVSMHGYAVVVSRPGFGACKDDMRFYLRDLMTRMKVGDLGMRKQALMNLHDVVVEDDKYVKLVVEVSEFVHVLVDFLGCNEVEVVEEAAKVVSVVAGFDSYKGVLVGAGVIAPLIRILECGSEVGKVGAARCLHRLTENSDNAWCVSAHGGVTVLLRICESVECKGELVSPACGVLGNLCGVEEIKRFMVEEGVVSTFVKLVRSKNEAIQVSSVELIQNIASGDELVRQMVVREGGVRVLLRVLDPKWTCSSKTREVVMRAIQNLCFSSSSCVTLLLSHGFVDQLMYYIRSGEVSIQELGLKVAFRLCEASDEAKKALGDAGFMAELVKFLNAKSFEVREMAAEALSGMVMVAKNRKRFVQDDQNIALLLQLLDPGEGNSGNKTLLISILMSLTSCNSGRKKIVSSGYAKNIERLAEAEVSSDAKRLVRKLSTNRFRSMLSGIWHS 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00694 562 SUPERFAMILY ARM repeat 144 543 IPR016024 -
Spst6g00694 562 Gene3D - 143 551 IPR011989 -
Spst6g00694 562 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 309 352 IPR000225 GO:0005515
Spst6g00694 562 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 6 561 - -
Spst6g00694 562 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 266 310 IPR000225 GO:0005515
Spst6g00694 562 SMART arm_5 340 383 IPR000225 GO:0005515
Spst6g00694 562 SMART arm_5 298 338 IPR000225 GO:0005515
Spst6g00694 562 SMART arm_5 427 467 IPR000225 GO:0005515
Spst6g00694 562 SMART arm_5 214 254 IPR000225 GO:0005515
Spst6g00694 562 SMART arm_5 255 297 IPR000225 GO:0005515
Spst6g00694 562 SMART arm_5 172 213 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00694 Spst-Chr6 6258342 6260030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00694 114 414 U-box Gene Family AT2G23140 23.762 5.35e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00694 - - gmx:100783537 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00510 3 8544253 8545956 Spst6g00694 6 6258342 6260030 PCT