Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00685 ATGTCCCTCAAAACCAGAATGGCCAAGACGTTACAACAGATAATCCCCAACCCAGACCACGATAGGGAACCGGTCAAAGGGAATAAGGTCAAGAGGGTGAATGCATACCACAACTGTCTCTACCATGGTCTCGTTACCAGATCAAGCAGAGGACCACTTACACTTGATGGTGATGAGTTTTTCAGTAACGGCGACACTCCTAATGTTAACCAAAACGTTGTTATCAAGCAAGGGAAGATGGAGTTTGATCTTGAAGACCCACTAGTCAGCTTGGGGGAAGAGAAAATCTGTAATGTATCAGAACTCTTTGCCTCCGAATCAGATCACATGCCCTCACCAAAGTACTTAAGTTTAACACATTTTCACGTTTTCTGTTGCGAGGCCGTATCTCTTATTCTTCAGGTTCAGCTTTCTTGCAAATTGGACCCTTTTGTAGCTTATCTTGCTATAAATTACATGCACCGTTTCATGTCAACCCAGGAAATTTCGCAGGGGAAGAAGTGGTATCTCAGGCTTGTTGTGGTATCATGTCTTTCTCTCGCTTCAAAGATGAAAAACACAACTTTGTCATTTTTGGAAATGCAGAAAGAAGATTGTAACTTTAAGGCTCAAAGTATTCAGAAAATGGAGCTTCTAATTCTCGGGGCACTGAAATGGCGTATGAGGTCAATTACACCTTTTTCTTTCCTGCACTTCTTTATCTCTTCAGCTGAAATTGAAGACCAATCACTGAAGCAAGCACTTAAAGAGAGAGCTTCTGTGGTAATCTTCAACGCTCAAAATGCACAAACTCTGAAATGCATCTCTCTTATGGCTGCAGACATTAAGCTTTTCAAGTATAAACCTTCAACTATTGCTGCAGCTGCCCTTATCTTTGCATCTCATGAGCTATTCCCACAGCAATATTCTATTCTGAGAGCTTCAATTATGGCCAGTGAGTACCTACATGAGGAGACATTGTTCAAATGCTTTGATTTGATGCAAGAGATTATGAGAATGGTAGCAAAGGAGTTAAAGACAGATACAAGCTTTTTAATAGCAGAAACTCCAGTGAGTGTGCTTGAGAGAAACACCAAACGACAAAGAATTTAA 1092 0.4084 MSLKTRMAKTLQQIIPNPDHDREPVKGNKVKRVNAYHNCLYHGLVTRSSRGPLTLDGDEFFSNGDTPNVNQNVVIKQGKMEFDLEDPLVSLGEEKICNVSELFASESDHMPSPKYLSLTHFHVFCCEAVSLILQVQLSCKLDPFVAYLAINYMHRFMSTQEISQGKKWYLRLVVVSCLSLASKMKNTTLSFLEMQKEDCNFKAQSIQKMELLILGALKWRMRSITPFSFLHFFISSAEIEDQSLKQALKERASVVIFNAQNAQTLKCISLMAADIKLFKYKPSTIAAAALIFASHELFPQQYSILRASIMASEYLHEETLFKCFDLMQEIMRMVAKELKTDTSFLIAETPVSVLERNTKRQRI 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00685 363 Gene3D - 112 222 - -
Spst6g00685 363 Gene3D - 101 323 - -
Spst6g00685 363 SUPERFAMILY Cyclin-like 205 336 IPR036915 -
Spst6g00685 363 SMART Cyclin_C_2 224 352 IPR004367 -
Spst6g00685 363 SUPERFAMILY Cyclin-like 102 221 IPR036915 -
Spst6g00685 363 PANTHER CYCLINS 111 329 IPR039361 -
Spst6g00685 363 Pfam Cyclin, N-terminal domain 103 221 IPR006671 -
Spst6g00685 363 Pfam Cyclin, C-terminal domain 224 332 IPR004367 -
Spst6g00685 363 CDD CYCLIN_AtCycD-like_rpt2 224 327 - -
Spst6g00685 363 SMART cyclin_7 130 215 IPR013763 -
Spst6g00685 363 FunFam D6-type cyclin 112 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00685 Spst-Chr6 6173559 6176599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00685 80 356 Core Cell Cycle Gene Families AT4G03270 37.201 4.35e-46 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00685 K18812 - gmx:100799985 435.261