Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00677 ATGACTCGCCACAGGAAAAATATATTCCAAAAGGCAAAGAATGAACAAAGATCAGAAGCAGGACAAGTTGCATCATCAGGACAACTGAAAGAAGGACCCGAAATAGCAGTGAAAAGACTTTCAAAAACTTCTGGACAAGGGTTAGAAGAATGTATGAATGAGGTATCAGTGATTTCAAAGCTTCAACATCGCAATCTTGTCAAACTTCTTGGCTGCTGTATTAAACAGGAGGAAAATATGTTGGTATACGAATACATGCCTAACAAGAGTTTGGATGTATTATTATTTGATCCAGTAAAAAAGAAAGATCTAGATTGGCCAAAACGCTTCAATATAATTGAAGGAATCTCTCGAGGTTTGCTTTATCTCCACAGAGATTCTAGACCAAAAATTGTGCATAGAGACTTGAAGGTTAGTAACATCTTGTTGGATGGAGAGCTAAACCCAAAAATATCAGACTTTGGTATGGCCAGAATATTTGGAGGCAATGATATACAGGCCAATACCAGAAGGGTTGTTGGAACATTTGGTTATATGCCTCCAGAATATGCATTCAGAGGGTTGGTTTCTGAGAAATTAGATGTCTTCAGCTTCGGAGTCTTGTTGCTAGAAATTATTAGTGGGAGAAAAATTAGCAGCTATTACGGTAGTGACCGATCATTGAGTCTCTTGGGATTTATAGGAGATGGAGGAAAGGATCCATACTTATTTAGCACAAATAATTTTGTGGGGAGGCAAACATGGGAGTTTGATTCAGAGGCAGGCAGTGGCAAGGAGAGAGAGGAAGTTGAGGCAGCTCGGGACAACTTCTATGAAAATCGGTTCCAGGTGAAGGCTTGTGGTGATCGACTTTGGCGTTTTCAGATTTTGAGGGAAAATAATTTCAAACAAAGAATAGCAAAGGTGGAGATAGAAGAGGGTGAAAGAATAACGTGCGAGAAAACAACGATCACACTGAAGAGGGCTGCTTCTTACCTTTCCGCACTACAAACCAGTGATGGCCATTGGCCTGCTCATCTTGCAGGTTCCCTCTTCTTTACTCCTGCATTGGTCATTTGTTTATACATAACAGGACATCTCGATTCTGTATTTTCAGAAGAATATCGTAAAGAAATTCTTCGTTACACATATTGTCACCAGAACGAAGACGGAGGTTGGGGACTGCACATAGAAAGCCACAGCACCATGTTTTGTACTACACTGAATTATATATGTATGCGAATTCTTGGAGAAGAACCCAATGGAGGTCAAAACAATGCTTGTGCTAAAGCAAGAAAGTGGATTCATGATCATGGTGGCGTCACGCAGATACCTTCATGGGGAAAATTTTGGCTTTCAGTACTTGGTGTGGTTGATTGGTGTGGAAGCAACCCAATGCCTCCGGAATTTTGGATCCTTCCTTCATTTCTTCCTATGCATCCGGGTAAAATGTGGTGTTACTGTCGGTTGGTATACATGCCTATGTCTTATCTATACGGGAAGAGATTTATGGGTCCAATCACACCCTTGATAGAAAATTTGAGAGAAGAACTCTTTATTCAACCTTATGATAAAAATATTTGGAAGAAAGCGCGACATTCATGTGCAAATGAAGATCTTTACTATCCTCATCATTGGATACAAGATCTAATATGGGATAGTTTATATGTATTCACCGAACCACTTCTAAATCGATGGCCTTTGAACAAGTTAGTGAGAGAAAAAGCACTTCAAGTAACAATGAAGCATGTCCATTATGAAGATGAAAATAGTCGATATATTGCTATTGGGTGTGTGGAAAAGGTTTTGTGCATGCTTGCTTGTTGGGTAGAAGATCCAAATGGAGATGCTTTCAAGAAGCATCTTGCAAGGCTCCCAGATTGTTTATGGGTTTCAGAAGATGGAATGACCATGCAGGGTATTGGAACCCAGTCATGGGATGCTGGTTTCATTGTTCAAGCTCTACTTGCTACTAACCTAATAGATGACTTTGGTCAAACATTTGCAAAAGCACACGATTTCATCAAGAAATCTCAGGTAACGGAAAATCCTTCAGGAGATTTTAAGAGTATGTATCGTCACATTTGTAAAGGGTCGTGGACCCTTGCAGATAAAGACCATGCATGGCAAGTTTCTGACACCACTGCAGAATGTTTGAAGTCTTGTCTACTTCTGTCAATGTTGCCAGAAGAGATTGTGGGAGAAAAAATGGAACCTGAAAAGTTGTATGATTCAGTCAATTTCATATTGTCACTTCAGAGTGCAAATGGAGGTGTGGCTGCATGGGAGCCAGCAAGAGCTCAGGAATGGTTAGAACTACTCAACCCTACGGAATTCTTTGCTGACATAGTGGTGGAGCATGAATATGTTGAATGCACTGCAGCAGCAATTCAAGCTTTAGTGTTGTTCAAAAAGCTTTATCCAGAGCATAGGAAGGAAGAGATAGAGAGTTTCATTGCTAAAGCAGTACCATTCATTGAAAATTCACAATTAGAGGATGGTTCTTGGTATGGAAACTGGGCGGTGTGCTTCACTTACTGCTCCTGGTTTGCAATTGGAGGTTTAGTTGCTGCTGGCAAGAGTTACAAAACTTGTGTTGCCATTCGTAAAGGTGTGGAATTTCTTCTTAAAAAACAAAATGAGGATGGTGGATGGGGAGAGAGTTACCTTTCTTGCCCGAGGAAGGTGTATGTACCTCTTGAAGGAGGTCGATCAAATGTTGTACAAACATCTTGGGCTCTAATGGCTCTAATTCTTGCTCAACAGGCTGAAAGAGACCCAACACCCCTTCATCGTGCAGCAAAGTTACTCATCAATTCTCAGTTAGAAGATGGTGATTGGCCCCAACAAGAAACCCTTGGAGTATACTTGAGGAATTGCTTGGTTCATTACCCATTTTACAGAAATGTTTTCCCAATGTGGGCTTTGGCTGAATATCGTAGAAATGTTCTATTGCCTTCCACTACTATTTAA 2952 0.4055 MTRHRKNIFQKAKNEQRSEAGQVASSGQLKEGPEIAVKRLSKTSGQGLEECMNEVSVISKLQHRNLVKLLGCCIKQEENMLVYEYMPNKSLDVLLFDPVKKKDLDWPKRFNIIEGISRGLLYLHRDSRPKIVHRDLKVSNILLDGELNPKISDFGMARIFGGNDIQANTRRVVGTFGYMPPEYAFRGLVSEKLDVFSFGVLLLEIISGRKISSYYGSDRSLSLLGFIGDGGKDPYLFSTNNFVGRQTWEFDSEAGSGKEREEVEAARDNFYENRFQVKACGDRLWRFQILRENNFKQRIAKVEIEEGERITCEKTTITLKRAASYLSALQTSDGHWPAHLAGSLFFTPALVICLYITGHLDSVFSEEYRKEILRYTYCHQNEDGGWGLHIESHSTMFCTTLNYICMRILGEEPNGGQNNACAKARKWIHDHGGVTQIPSWGKFWLSVLGVVDWCGSNPMPPEFWILPSFLPMHPGKMWCYCRLVYMPMSYLYGKRFMGPITPLIENLREELFIQPYDKNIWKKARHSCANEDLYYPHHWIQDLIWDSLYVFTEPLLNRWPLNKLVREKALQVTMKHVHYEDENSRYIAIGCVEKVLCMLACWVEDPNGDAFKKHLARLPDCLWVSEDGMTMQGIGTQSWDAGFIVQALLATNLIDDFGQTFAKAHDFIKKSQVTENPSGDFKSMYRHICKGSWTLADKDHAWQVSDTTAECLKSCLLLSMLPEEIVGEKMEPEKLYDSVNFILSLQSANGGVAAWEPARAQEWLELLNPTEFFADIVVEHEYVECTAAAIQALVLFKKLYPEHRKEEIESFIAKAVPFIENSQLEDGSWYGNWAVCFTYCSWFAIGGLVAAGKSYKTCVAIRKGVEFLLKKQNEDGGWGESYLSCPRKVYVPLEGGRSNVVQTSWALMALILAQQAERDPTPLHRAAKLLINSQLEDGDWPQQETLGVYLRNCLVHYPFYRNVFPMWALAEYRRNVLLPSTTI 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00677 983 CDD SQCY_1 319 972 IPR018333 GO:0005811|GO:0016104|GO:0016866
Spst6g00677 983 FunFam Terpene cyclase/mutase family member 610 979 - -
Spst6g00677 983 Pfam Squalene-hopene cyclase N-terminal domain 320 623 IPR032697 -
Spst6g00677 983 NCBIfam squalene/oxidosqualene cyclases 318 974 IPR018333 GO:0005811|GO:0016104|GO:0016866
Spst6g00677 983 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 572 976 IPR008930 -
Spst6g00677 983 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 86 177 - -
Spst6g00677 983 SUPERFAMILY Protein kinase-like (PK-like) 28 215 IPR011009 -
Spst6g00677 983 Gene3D - 340 635 - -
Spst6g00677 983 FunFam Uncharacterized protein 340 570 - -
Spst6g00677 983 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 342 631 IPR008930 -
Spst6g00677 983 Gene3D Transferase(Phosphotransferase) domain 1 86 241 - -
Spst6g00677 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Spst6g00677 983 Gene3D - 711 945 - -
Spst6g00677 983 FunFam Uncharacterized protein 19 85 - -
Spst6g00677 983 ProSiteProfiles Protein kinase domain profile. 9 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00677 983 Gene3D Phosphorylase Kinase; domain 1 4 85 - -
Spst6g00677 983 Pfam Protein tyrosine and serine/threonine kinase 30 209 IPR001245 GO:0004672|GO:0006468
Spst6g00677 983 Pfam Squalene-hopene cyclase C-terminal domain 639 974 IPR032696 -
Spst6g00677 983 SMART serkin_6 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00677 983 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 234 978 IPR018333 GO:0005811|GO:0016104|GO:0016866
Spst6g00677 983 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00677 Spst-Chr6 6113888 6125018 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00677 27 224 Receptor kinase-like Gene Family AT4G11530 67.677 2.59e-83 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst6g00677 SQHop_cyclase_C 3e-47 CL0059
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00677 K15813 - gmx:100797878 1419.83