Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00675 ATGTCCATCTCCGTTTATGTGTTTCTCTTCTGCTTCATCGCTCTCCACAATCTGTTTTCCTTCGCCGCAAGTTCAAAGATCAGGATTACGCGGGGTGTCATGATCAGGGACAAGGAGCTTGAGACATTGGTGTCTGAAGAGCTCAACTTCGCTATGGGTTTCTTCAGTTTCGGAAACTCCTCTTCCCGATACGTCGGAATTTGGTACCACAACATTCCGGGGCCACCGGTTATATGGGTCGCAAACCGCGACAAACCCATCAACGGCACCGGAGGATCCATCACTGTAGCGAATGATGGCAACCTTGTAGTCCTTGATGGAGCCATGAACCATGTCTGGTCCACCAACGTTTCCATTGATAGCAGCAAGAAAAACTCCTCAGCGTCGCTTCGCGAGGATGGTAACCTCGTTCTCTCGAGCGAAAAGAAAGATGTGTGGCAAAGCTTTGAGAATCCAACGGATACATACATGCCTGGTATGAGGGTTCCAGTGGGGGCTTCGCCTGAGAAGAGTGGTGGCTATCTGTTCACTTCATGGAAGTCATCAACGGATCCTTCGAAAGGAAACTATACTATGGGGGTTGATCCTGAAGGGTTACCTCAGATAGTGGTTTGGGAAGGAGACGAAAGAAGGTGGAGAACTGGGTATTGGGATGGTAGAATGTTTCAAGGGGTGTCTATCACAGGAAATTATCTTTACGGTTTCACGCTTAATGGGGATGGTAAAGGAGGTAGGTACTTCATATATAACCCGTTAAACGGCACTGATAAGGTGAGGTTTCAAATGGGGTGGGATGGGTATGAGAGAGAGTTCAGGTGGAATGACGATGAGAAACAATGGAATGAGATTCAAAAAGGGCCTTCTCATGAGTGTGAGGTTTACAACAAGTGTGGGAATTTTGCGGCGTGTGATGTGTCCCCTTCGGGTTTACCTGTTTGTACTTGCATACAAGGTTTTGAACCGAAGCATAGGGATCAATGGGATAAGGGAAACTGGTCGGGTGGGTGTACGAGGATGACTCCACTCAAGGCTCAGAGGAAGAATGTTACTTCTGTTGGCACTACTCAGGTTAGTGTTGGAGATGATGGGTTCTTGGATCGTAGGTCTATGAAGTTGCCGGATTTCGCACGTGTTGTTGGCACGAATGCCTGTGAGAAAGAGTGTCTGAACGATGAGTCTTGTACGGCGTATGCCAATGTTAATGGAATAGGGTGCATGGTGTGGAATGGAGATTTGGTTGATATTCAACAGTATGAAAGTGGAGGAAATACACTACATATCCGACTCGCTGATTCTGATTTAGACGATGGAGGAAAAAAGAATATGATTGTGATAATATCGGCTATTGTGGCGGGGTTTATCTGCCTAGGCATCTTTGTATGGCTGGTGTGGAGATTCAAGGGAAAACTTAAAGTTCTGCCTTCAGTTTCCCCAGCTTCTTGTTGCAAGAATAGTGATGTACTACCGGTTTTTGATGGAAGTAAGAGCAGAGACATGTCAGCAGAATTTTCAGGATCAGCCGACCTTAGTTTGGAGGGTAGCCAACTAAGCGGGCCAGAATTTCCACTTTTCAATTTCAGTTGCATTTCAATAGCCACAAACAATTTCTCAGAAGAAAATAAGCTTGGGAAAGGGGGCTTTGGCCCTGTCTACAAGGGAAAGCTTCCAGGAGGAGAACAAATAGCTGTTAAGAGGCTTTCAAGACCGTCTGGCCAAGGTTTAGAGGAGTTCAGAAATGAAATGATGCTGATAGCGAAACTACAACACAGAAATCTGGTTAGACTGATGGGATGTTCTATTCAAGGCGAAGAGAAGTTGCTGGTATATGAATACATGCCAAACAAAAGCTTGGATTGCTTTTTATTTGATCCAATCAAACAAACACAACTAGATTGGACAAGACGGTTTGAAATCATTGAAGGCATTGCAAGAGGATTGCTCTACTTACACCGAGATTCAAGACTTAGAATAATTCATCGAGACTTAAAAGCGAGTAACGTTTTGTTGGATGAAAACATGAACCCAAAAATATCAGACTTTGGTTTGGCTAGGATATTTGGTGGGAACCAGAATGAAGCGAATACAAACAGAGTAGTTGGTACATATGGTTACATGGCCCCTGAATATGCAATGGAAGGTCTGTTTTCCGTCAAATCTGATGTATATAGTTTTGGTGTATTACTACTAGAAATTTTGAGTGGCCGCAGAAACACTAGTTTTCGTCACTCAGATGACTCGAGTCTCATAGGATATGCGTGGCATCTTTGGAATGAACAGAGAGCAATGGAGCTAGTGGATCCCTGCATTCGTAATTCTAGTCCTAAAAACAAAGCTTTGAGATGCATACACATAGGGATGTTATGTGTGCAAGATTCAGCAGCTCAAAGACCTAACATGTCTGCCGTGGTGTTGATGCTGGAAAGTGAAGCAACAACTCTTCCTATGCCTACGCAACCTTTGATTACATCCATGAGAAGATCTGAGGACAGACAATTTTACATGGATGGCCTTGATGTTTCAAATGATTTGACAGTCACAATGGTGGTAGGGAGATAG 2556 0.4429 MSISVYVFLFCFIALHNLFSFAASSKIRITRGVMIRDKELETLVSEELNFAMGFFSFGNSSSRYVGIWYHNIPGPPVIWVANRDKPINGTGGSITVANDGNLVVLDGAMNHVWSTNVSIDSSKKNSSASLREDGNLVLSSEKKDVWQSFENPTDTYMPGMRVPVGASPEKSGGYLFTSWKSSTDPSKGNYTMGVDPEGLPQIVVWEGDERRWRTGYWDGRMFQGVSITGNYLYGFTLNGDGKGGRYFIYNPLNGTDKVRFQMGWDGYEREFRWNDDEKQWNEIQKGPSHECEVYNKCGNFAACDVSPSGLPVCTCIQGFEPKHRDQWDKGNWSGGCTRMTPLKAQRKNVTSVGTTQVSVGDDGFLDRRSMKLPDFARVVGTNACEKECLNDESCTAYANVNGIGCMVWNGDLVDIQQYESGGNTLHIRLADSDLDDGGKKNMIVIISAIVAGFICLGIFVWLVWRFKGKLKVLPSVSPASCCKNSDVLPVFDGSKSRDMSAEFSGSADLSLEGSQLSGPEFPLFNFSCISIATNNFSEENKLGKGGFGPVYKGKLPGGEQIAVKRLSRPSGQGLEEFRNEMMLIAKLQHRNLVRLMGCSIQGEEKLLVYEYMPNKSLDCFLFDPIKQTQLDWTRRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNVLLDENMNPKISDFGLARIFGGNQNEANTNRVVGTYGYMAPEYAMEGLFSVKSDVYSFGVLLLEILSGRRNTSFRHSDDSSLIGYAWHLWNEQRAMELVDPCIRNSSPKNKALRCIHIGMLCVQDSAAQRPNMSAVVLMLESEATTLPMPTQPLITSMRRSEDRQFYMDGLDVSNDLTVTMVVGR 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00675 851 SUPERFAMILY Protein kinase-like (PK-like) 521 836 IPR011009 -
Spst6g00675 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Spst6g00675 851 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 149 - -
Spst6g00675 851 CDD PAN_AP_plant 361 430 - -
Spst6g00675 851 PIRSF SRK 1 851 IPR024171 GO:0004674
Spst6g00675 851 Pfam PAN-like domain 360 415 IPR003609 -
Spst6g00675 851 Gene3D - 21 149 IPR036426 -
Spst6g00675 851 ProSiteProfiles PAN/Apple domain profile. 359 430 IPR003609 -
Spst6g00675 851 Pfam Protein tyrosine and serine/threonine kinase 539 804 IPR001245 GO:0004672|GO:0006468
Spst6g00675 851 ProSiteProfiles Protein kinase domain profile. 536 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00675 851 SMART serkin_6 536 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00675 851 Pfam D-mannose binding lectin 77 180 IPR001480 -
Spst6g00675 851 ProSiteProfiles Bulb-type lectin domain profile. 26 151 IPR001480 -
Spst6g00675 851 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 797 - -
Spst6g00675 851 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 501 611 - -
Spst6g00675 851 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 612 814 - -
Spst6g00675 851 ProSiteProfiles EGF-like domain profile. 287 325 IPR000742 -
Spst6g00675 851 Gene3D Phosphorylase Kinase; domain 1 506 611 - -
Spst6g00675 851 Pfam S-locus glycoprotein domain 212 322 IPR000858 GO:0048544
Spst6g00675 851 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 219 IPR036426 -
Spst6g00675 851 CDD STKc_IRAK 542 807 - -
Spst6g00675 851 SMART blect_4 34 152 IPR001480 -
Spst6g00675 851 Gene3D Transferase(Phosphotransferase) domain 1 612 815 - -
Spst6g00675 851 CDD B_lectin 41 152 IPR001480 -
Spst6g00675 851 SMART ntp_6 359 429 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00675 Spst-Chr6 6088140 6091539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00675 437 819 Receptor kinase-like Gene Family AT4G23230 53.385 5.52e-134 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst6g00675 PK_Tyr_Ser-Thr 3.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00675 - - gmx:102660295 1514.21