Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00672 ATGCCATTTGAAATTTGGATGCCAAATATGACCAAGAGGAGAGTGAGAAGGAACAAACTTGTCACCATTATTTTTACTTTTGCGTGTATGTCAATCCTTCAGAAAACGTCTTATGCAGACGATGCCTTGACTCCAACATCTTCCATTGCAGATGGTCAAGAACTCATTTCTGCTGGACAGAATTTTTCTCTTGGATTCTTCACTCCAGGAACCTCTAAGAGCCGCTACATAGGGATATGGTACAAGAATATTACGCCTCGAACCGTAGTTTGGGTAGCAAACAGAGATCACCCACTAAATGACTCGAGTGGAAATTTAACCGTTGCTGCTGATGGTAATATTGTACTTTTTGATGGAGCAAGTAACAGAGTATGGTTTACAAATTCATCAAGGTCAATCCAAGAACCTATTGCAAAGCTGTTGGATTCTGGTAACTTTGTCTTGATGGATGGAAAGAACAGTGACCCTGATAGTTATATATGGCAAAGCTTTGATAATCCAACAGACACAATGTTACCTGGGTTAAAGTTGGGTTGGGATAAGAACTTAGGTATCAACAGATATTTGACTTCTTGGAAGAGTGCTAATGACCCCTCTCCTGGAAACTTTACCTTCAGATTTGACCAGAAAGAATTTCCCGAGTTGGTAATCCGTCAGGGAACGAACATCACGTTCAGAAGCGGAATTTGGGATGGTATCCGTTTTAATTCAGATGATTGGTTGTCATTTCTTGGAATTAGAGCCTTCAAGCCACAACTTTCAGTAACTAGCACCGAGGCAGTGTACTGGGATGAACCTGGAGATAGATTGTCAAGATATGAGATGAAGGATGATGGACTACTTCAAAGATATATTTGGGACAACAAAAATTTTAAATGGACTCTGATGCATGAGGCAAGAAAAGACTTTTGTGATAACTACGGAACATGTGGGGTGAATGGTATTTGCAATATTAAGAATGTGCCTGCTTACTGTGATTGCTTGAAAGGGTTCATACCAAATTCACCGGACGAATGGGATTCATTTAATTGGTCTGGTGGGTGCGTCAGAAGAACACCCTTGAACTGCACGCAAGGTGATGGGTTTCAGAAATTAAGTTGGATAAAACTACCCATGTTGTTGCAATTTTGGACTAATAATAGCATGAGTCTTGAAGAATGCAAGGTGGAGTGCTTGAAGAACTGTTCCTGCACCGCATATGCAAATTCAGCCGTGAATGAAGGGCCTCATGGATGCTTGATTTGGTTTGGGGACTTGACTGACATTCGGCAGCTTATAAATGAAGAGGGTGTACAACTTGATCTTTATGTAAGGTTAGCCGCTTCTGAAATAGGTATGCATGGGTTTTGTTTTAACATGACATGTAATGTTTACCCTCATAACATGTCTCTAACTTGTTTTCTTTTTTGTTTACATATGCATTCTCTTGAAGAAATACGTTTTCTAAAACTTAAGCATCTGTTTGATTCTTGTGAAGAGTCCACTACTAATGGAAGTAAAAGGAGAAACATTGCACTGATTATTTCGGTACCTGTGGCGCTGCTGCTTTGTTGTATCATTTTCTTCCTTTCTAAGATGTATATAAAACGGAGGACACGTACTGGTTTGGGTAAGATTCTTAAGAAATTCAACTTGGCTCAGATGATCAACAGATCAAGTCACAGAAATCATAATGAAGATCAAGCGTCGCCTATTTTTGATATATATACTATTTTGGCAGCTACAAACAATTTTTCTATTGAGAACAAGATTGGGGAAGGTGGTTTTGGCCCAGTATACAGGGGTAAATTGGCTCATGGACAAGAAATAGCTGTGAAAAGGCTATCAAAAACCTCAAAACAAGGCATCTCAGAGTTTATGAATGAAGTTGGATTGGTAGCCAAACTCCAACACCGTAATCTTGTGAGTGTTTTAGGAGGGTGCACTCAAGGAGAGGAAAGAATGCTGATCTATGAATACATGCCAAATAGTAGCTTGGACCACTTCATATTTGACAGCCAGTTGAACCCCAAAATTTCTGATTTTGGTGTGGCCCGCATCGTTGAAGGAGATCATGCTTCAATAACAACAGATGAAATTGCTGGGACAATTGGCTATATGCCCCCTGAGTATGCAGTAAGCGGGATTCTTTCCCTGAAGTCTGATGTATATAGCTTCGGAGTTATAGTGTTAGAGATATTAAGTGGGATCAAAAGTAGTAACTACAAGATCAAACGTCCAGATCATGACCATAATCTGTTGGGGCAGGCGTGGACATTATGGAAAGATGGACGAGCTGTGGCATTTATGGATGTTAATTTAGACCTTACAGCTGTTCCATCAGAATTACTAAGGTGCCTGCAAGTTGGTCTCTTGTGTGTTCAAAAGTTACCTGAAGATAGACCAACTATGTCTTCTGTGGTTTTCATGTTGAGCAATGAAAGCATAGCACTTTCCCAACCAAAGAAGCCTGGCTTCTTTGAAGAAGAGACAGAGCATGGGTACAGCGAGATGGAAAGTTTTAGTAACAGTGCTATGACTATAACTCTGTTAGAAGCTCGAAGTTAG 2547 0.4013 MPFEIWMPNMTKRRVRRNKLVTIIFTFACMSILQKTSYADDALTPTSSIADGQELISAGQNFSLGFFTPGTSKSRYIGIWYKNITPRTVVWVANRDHPLNDSSGNLTVAADGNIVLFDGASNRVWFTNSSRSIQEPIAKLLDSGNFVLMDGKNSDPDSYIWQSFDNPTDTMLPGLKLGWDKNLGINRYLTSWKSANDPSPGNFTFRFDQKEFPELVIRQGTNITFRSGIWDGIRFNSDDWLSFLGIRAFKPQLSVTSTEAVYWDEPGDRLSRYEMKDDGLLQRYIWDNKNFKWTLMHEARKDFCDNYGTCGVNGICNIKNVPAYCDCLKGFIPNSPDEWDSFNWSGGCVRRTPLNCTQGDGFQKLSWIKLPMLLQFWTNNSMSLEECKVECLKNCSCTAYANSAVNEGPHGCLIWFGDLTDIRQLINEEGVQLDLYVRLAASEIGMHGFCFNMTCNVYPHNMSLTCFLFCLHMHSLEEIRFLKLKHLFDSCEESTTNGSKRRNIALIISVPVALLLCCIIFFLSKMYIKRRTRTGLGKILKKFNLAQMINRSSHRNHNEDQASPIFDIYTILAATNNFSIENKIGEGGFGPVYRGKLAHGQEIAVKRLSKTSKQGISEFMNEVGLVAKLQHRNLVSVLGGCTQGEERMLIYEYMPNSSLDHFIFDSQLNPKISDFGVARIVEGDHASITTDEIAGTIGYMPPEYAVSGILSLKSDVYSFGVIVLEILSGIKSSNYKIKRPDHDHNLLGQAWTLWKDGRAVAFMDVNLDLTAVPSELLRCLQVGLLCVQKLPEDRPTMSSVVFMLSNESIALSQPKKPGFFEEETEHGYSEMESFSNSAMTITLLEARS 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00672 848 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 30 795 - -
Spst6g00672 848 Gene3D Phosphorylase Kinase; domain 1 540 653 - -
Spst6g00672 848 PIRSF SRK 664 847 IPR024171 GO:0004674
Spst6g00672 848 PIRSF SRK 13 669 IPR024171 GO:0004674
Spst6g00672 848 ProSiteProfiles PAN/Apple domain profile. 356 440 IPR003609 -
Spst6g00672 848 SUPERFAMILY Protein kinase-like (PK-like) 561 825 IPR011009 -
Spst6g00672 848 Pfam PAN-like domain 356 422 IPR003609 -
Spst6g00672 848 SMART blect_4 46 167 IPR001480 -
Spst6g00672 848 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 35 164 - -
Spst6g00672 848 Pfam Protein tyrosine and serine/threonine kinase 579 665 IPR001245 GO:0004672|GO:0006468
Spst6g00672 848 Pfam Protein tyrosine and serine/threonine kinase 669 801 IPR001245 GO:0004672|GO:0006468
Spst6g00672 848 Gene3D Transferase(Phosphotransferase) domain 1 657 816 - -
Spst6g00672 848 Gene3D - 35 164 IPR036426 -
Spst6g00672 848 Pfam S-locus glycoprotein domain 225 334 IPR000858 GO:0048544
Spst6g00672 848 ProSiteProfiles Bulb-type lectin domain profile. 40 161 IPR001480 -
Spst6g00672 848 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 543 653 - -
Spst6g00672 848 CDD PAN_AP_plant 352 440 - -
Spst6g00672 848 CDD B_lectin 46 167 IPR001480 -
Spst6g00672 848 Pfam D-mannose binding lectin 88 193 IPR001480 -
Spst6g00672 848 SUPERFAMILY alpha-D-mannose-specific plant lectins 89 198 IPR036426 -
Spst6g00672 848 ProSiteProfiles Protein kinase domain profile. 578 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00672 848 SMART ntp_6 357 439 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00672 Spst-Chr6 6066640 6070256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00672 566 819 Receptor kinase-like Gene Family AT4G11530 45.364 3.51e-76 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst6g00672 PK_Tyr_Ser-Thr 2.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00672 - - vra:106774971 1403.27