Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00659 ATGTTTGAGGCTTGGCTTTCTCTCAAGAAGACGCTCCAGTGCAAACCACATCCAAATCAAGTTCATGATCCAAAGACTATTAGGCAACAAAAAGGTAATCAGCGAACAAAGTTAGCCAGTCTTGAGATTTCAAATACCAAAGATTTCATCCAAGAAAGCAAGAGGCACTCAAAAAATTCACTAGGTTTCAAAGGGGACATTGACATCACTGGTCCCATAACCCATGAAATTACTCTCAATAGCTCAAACCATGAAACTAGTCGAAGTTTTCCTTGTCCTCAAAGCACTAGCAGCAATAAAGCTTCTCATAGAACACGAAGGTCAGCTACATCTTCAAGGATAACATTTCCTGTAGATTACAATGAAGCAAATGTCTCCTCCAACACAAGGACGTTGGTTCAGATGGATTCTGATGGTTGCTCAACATTGACATGTCACAAATGTGGCGAGAGATTAAAAAATGTTGATGCTGTAGAAGCACACCATATCTCCCACCATTCAGTTATTGACCTTGAAGAAGATTCATCTAGACAGATTATAGAAACCATATGTGGAACAAGATCGGTTTATTCTGAAAGCATGTTGGGCGAGATTGATTGCATCTTGAAGGTTCTGAGCATACCAAAAACCTTTGCTTGTTTTGAGGAATATAGAGAAAAGGTGAAGGAAAAGGCTGACAAAGAAAAGAAAAAGCACCCACGTTGTCTGGCTGATGGAAACGAACTTTTAAGGTTCCATGGCACAACCATTGCATGCTCTCTCGGGGTAAACAGTTCTTATAGCCTGTGCACTTTAGACTACTGTGGTATATGTCAAATTCTGAGACATGGGTTCTCGACCAACAAGGAATTCAAAGGTGCATTGGGCGTTTACACCACTTCCACAAGTGGAAAAGCCTTTGAGTCGATTTCCATTATGACATCCCATGAGAGAGCATTTCCAAGAAAATCCATCATAGTGTGCAGAGTAATCGCTGGGAGAATTCATAGCCCTCTTGAAGGAATTGAGGAAAGGGTTGATTCAGAGTTTGATTCATTGGCAGAAAAATATGGGCATTCAGATGTTGAGGAACTGTATGTGTTAAATCCCAGAGCCCTTCTCCCTTGCTTTGTGGTAATCTACAAGCAACAAACAGCCAAGGTTAGAAGGTTCAGCCCAAGCTTAAGGATAAGCAGCTTTTAA 1182 0.4095 MFEAWLSLKKTLQCKPHPNQVHDPKTIRQQKGNQRTKLASLEISNTKDFIQESKRHSKNSLGFKGDIDITGPITHEITLNSSNHETSRSFPCPQSTSSNKASHRTRRSATSSRITFPVDYNEANVSSNTRTLVQMDSDGCSTLTCHKCGERLKNVDAVEAHHISHHSVIDLEEDSSRQIIETICGTRSVYSESMLGEIDCILKVLSIPKTFACFEEYREKVKEKADKEKKKHPRCLADGNELLRFHGTTIACSLGVNSSYSLCTLDYCGICQILRHGFSTNKEFKGALGVYTTSTSGKAFESISIMTSHERAFPRKSIIVCRVIAGRIHSPLEGIEERVDSEFDSLAEKYGHSDVEELYVLNPRALLPCFVVIYKQQTAKVRRFSPSLRISSF 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00659 393 MobiDBLite consensus disorder prediction 82 111 - -
Spst6g00659 393 Gene3D - 161 380 - -
Spst6g00659 393 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 5 374 - -
Spst6g00659 393 SUPERFAMILY ADP-ribosylation 227 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00659 Spst-Chr6 5959590 5961176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00659 4 375 C2H2 Transcription Factor Family AT5G54630 41.372 6.66e-98 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst6g00659 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00659 - - gmx:100792577 597.43