Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00656 ATGGCGCAGAAGCAGAAGCCGAAACGTCCTTCCCCTCTCGATGAGCCACCCACGGCTTCTTCTTCAGATTCCGAGGAAGAAGAAATGCAGCAACCGTCCTCTATGCAACATGAAGAGGAAGAGGAGGAAGAAGTTTCCTCGGGAGAGGAGGAGGAAGAATCCTCCGGAGAAGAGGCAGAAGATGATGATCTTCCACCGCCTATCTCCAAAACCCACGCTCCACCCCCTCCCAAAACCCCTCACCCCCAGCCCTCATCCTCTGATTCCAAAACCGAATCCGAATTCGGGACCGAGTCCGAATCCGAATCCACTCCCGCTAAGGTGGTGAAGCCCCTCGCGTCCAAGCCCATGGACCAGGCCCAGAAGCCCAAGGTCTTACCTGCGACGGCGCCATCCAAACCGTCATTGAAACGTCCCGCCGAGAACAACAACGCCGCCCACGTCGCGAAGAAGAAGAAGAAATCCGGCGATTCGTCTTCTTCCACTGCTGCTTCCGACGAGGAGATGGAAGTGGACGGGAAGAAGTCCGGCGATCAACTGAAGAAGTCAGGCGATCAACTGAAGAAGCAGAGGCTGTGGAGCGAGGAGGACGAACTCGCCATTCTGAAGGGCATGATTGAGTTCGCCTCAAAAACAGGGCAGGACCCTCTTAAGTTTGCGGGTACCAATGCTTTCCATGATTTCATGAAGAAGTCGGTCCATGTGGAAGTTACAGGCAACCAGCTGAAGGAGAAGGTGCGTAGACTGAAGAAAAAGTATGAGATCGCTGCAGTGAGAGGGAACAGCGCCGAGGGCCTTACATTTACAAAGCCGCATGATCAGAAAACATTTGAGTTGTCGAAGAAGGTTTGGGGAAGTGAGCAAGATGGTGGAGTGGCCAATGGGGCGGTGGAAAAGCCCAAGGCTAATGGGAGTGCTGCTAAGACTCCAAAGAAGAAGGAAACCGGTAGCAGGAATGTAGCTTCTGCCAAGAAAGTTAAACCTGAACCAAAGCAGGAGCTGGCTCCGGTGTTGTCCTTGGAGTGGAAGGGATCTGAAAAGATGCAGATTGATCCAAAGCCTGATAGTGGCGAAGTGACTATGTTTTTGCATGCAGTGTCCCGGTTTACACAGGGTTTTGGTATTTGTGGGCTGGACGAGCGTGATGTGAGGAGGGGGTTGGAGTTGATTGGAGAATCGAAGAGCGCAGAGTTGAGGGAAAAGTGGAAGAAATTACAACGTGCTGAGTTGGAACTGTTTGTAAAACGGGCAGAACTGATTGCGGAGCAGACCAAGTTGATAGCTGAGGCACTTTGGTCATCTAACCATTAA 1311 0.5217 MAQKQKPKRPSPLDEPPTASSSDSEEEEMQQPSSMQHEEEEEEEVSSGEEEEESSGEEAEDDDLPPPISKTHAPPPPKTPHPQPSSSDSKTESEFGTESESESTPAKVVKPLASKPMDQAQKPKVLPATAPSKPSLKRPAENNNAAHVAKKKKKSGDSSSSTAASDEEMEVDGKKSGDQLKKSGDQLKKQRLWSEEDELAILKGMIEFASKTGQDPLKFAGTNAFHDFMKKSVHVEVTGNQLKEKVRRLKKKYEIAAVRGNSAEGLTFTKPHDQKTFELSKKVWGSEQDGGVANGAVEKPKANGSAAKTPKKKETGSRNVASAKKVKPEPKQELAPVLSLEWKGSEKMQIDPKPDSGEVTMFLHAVSRFTQGFGICGLDERDVRRGLELIGESKSAELREKWKKLQRAELELFVKRAELIAEQTKLIAEALWSSNH 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00656 436 MobiDBLite consensus disorder prediction 288 330 - -
Spst6g00656 436 MobiDBLite consensus disorder prediction 15 29 - -
Spst6g00656 436 MobiDBLite consensus disorder prediction 305 330 - -
Spst6g00656 436 MobiDBLite consensus disorder prediction 1 193 - -
Spst6g00656 436 Pfam Protein of unknown function, DUF573 190 285 IPR007592 GO:0006355
Spst6g00656 436 MobiDBLite consensus disorder prediction 37 62 - -
Spst6g00656 436 MobiDBLite consensus disorder prediction 68 83 - -
Spst6g00656 436 PANTHER BNAANNG10740D PROTEIN-RELATED 30 429 IPR007592 GO:0006355
Spst6g00656 436 MobiDBLite consensus disorder prediction 84 104 - -
Spst6g00656 436 MobiDBLite consensus disorder prediction 167 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00656 Spst-Chr6 5950456 5951766 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00656 8 430 GeBP Transcription Factor Family AT1G61730 30.664 2.31e-30 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Spst6g00656 DUF573 1.8e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00656 - - gmx:100807745 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00656 6 5950456 5951766 Spst6g00656 6 5950456 5951766 ECH