Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00654 ATGAGCAATAGTGATTGGATGTTGGATTATGATTATCTAGACACCATTTCCCTCCCCAATTTGTCTTGGTCTTCTTCCTCTCCTCCTCCCGCCCTCAGTGTGGAGGTAGATGACTCGTTGGGAATTTCGGATGGTTTCATGGAAAACGGATCAAGGAAACGTTTGAGGTTTTTGGAACTGGGGTCTATCCTGTACCCTGAAAGGCCTCTCAAAATGGACAAGGCTGTTATATTAAGTGATGCAGCTCGAATGGTGCCTCAGTTACGAGAGGAAGCTCAGAAGCTACGAGAATCCATTGAGAATCTACAAGAGAAAATCAATGAATTGAAGGCTGAGAAGAATGAGCTTCGGGAGGAGAAGCAGCGACTAAAAACAGAGAAAGATAACCTTGAGCAGAAGATTGAGGCCATGAGTTCACAACCTAGCTTTCTGCCTGCGTTTCCTGCACCAGGACAAGTTATTGGAAGCAAGTTGGTGCCCTTCATGGGTTATCCAGGAGTTGCCATGTGGCAGTTTTTACCACCTGCTGCTGTTGACACCTCACAGGACCATGTACTTAGACCCCCAGTTGCATAA 576 0.4618 MSNSDWMLDYDYLDTISLPNLSWSSSSPPPALSVEVDDSLGISDGFMENGSRKRLRFLELGSILYPERPLKMDKAVILSDAARMVPQLREEAQKLRESIENLQEKINELKAEKNELREEKQRLKTEKDNLEQKIEAMSSQPSFLPAFPAPGQVIGSKLVPFMGYPGVAMWQFLPPAAVDTSQDHVLRPPVA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00654 191 SUPERFAMILY Prefoldin 86 145 - -
Spst6g00654 191 Gene3D - 52 118 IPR036638 GO:0046983
Spst6g00654 191 Coils Coil 78 140 - -
Spst6g00654 191 PANTHER BHLH TRANSCRIPTION FACTOR 56 191 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00654 Spst-Chr6 5900258 5901812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00654 3 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 51.528 5.12e-65 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00654 - - ccaj:109814067 282.337