Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00650 ATGGCGGGTTTTGGTGCTGAAAGTGAAATAGATTGCTTGCAAACCATCAAGAAAATGGACCCGTTTAATCACTTATCTAGCTGGGATTTCGAGAGCAACATTGAGGGTGGCATATGTATATTCAGCGGTGTTGAATGCTGGAATCATCTGGAAGATAGAGTAATCAGTCTCTGGCTTTCTAACATGGAGCTGAAGGGCCAGTTCCCTCGTTGCATTGAAGATTTCACATGGTTGCAGACTCTGGATCTCTCACACAACGAGCTTTCTGGATATATCCCAAATGATATCGCAGATAAGCTGCCATATCTGGTCACACTTGATCTCTCAAATAACTATTTATCTGGTGAAATTCCAAAGGGTATTGCCAATTTGTCAGGCTTATTTTCCCTTCTACTTGATGGCAACCAGTTAACGGGCCAAATCCCACAAGAAGTTGGGCTGCTTCCCTTTCTTAGAGATTTTAGTGTTGCTAACAACTTGTTAGAAGGGCCAGTTCCTGTTTTTGTGAGCAATGTTAACGTGAGTTTGAGCTATGCCAATAATAGTGGACTCTGTGGGGGAGTACTAGGAAGCTGTGATGAGAGCTTGTTTGGTAGATCGTTTTGGTATAGTTTGATTATTGGTTTTGTTTCCTCAGCAACTTCTGTTATAGTTTCTTTCATGTACTCATATGCACCTTGGACAGAATTCAAAAAGATGAGTAACGCTATTCATCCCCTAATCAAGACTAGACAAGAAGCCGAATTGCTACCACTGGACTTGCAAGGAAGCAAAGAGCTAACAATATTGTTGGAGAGATTGATTACTAGAATGAGCTACAAGGAATTATGCAAGGCAACTGATTACTTTTGCACTGATAACATGTTGGGGATAGGAACGACAGGGATTATGTACAAGGCAAAGGTATCAAATAACTGTTTTCTGGCAGTTAAGAGACTATATGATGCTGATAAGTACAAGAGGGAATTCTTACTTGAAATAATGATTCCAGGAAGACACAGGCACAGAAACATAGCTCCCGTGCATGGATTCTGCATAGAGAAACAGGAAAGGGTTTTGGTGTATGAGTACATTTCTAATGGAAGACTCAGTGATTCGTTACAATCTGATGAGGGACATCAATCAATAAAAATAGAATGGCCAGAGAGGATTCACATCGCACTTGGGCTTGCCAGAGGTTTATCTTGGCTTCATAAAAGGTGCAAGATAGTCCACCTCAATTTAGATTCGGAGTGTGTCTTGTTGGACAAGAATTTTGAGCCAAAAATTTCCAATTTTGGCAAGGCAAAATTCATAAACCAGACGGTTGAAGATCATGTGAGGTTAAAATTGTTTTTGATAGATGTACTTGGAGGGAAGGATTCTGTTGAGAGGGATGTCTATGACTTTGGAATAATCCTTTTTGAACTATTAACAGGGAAAAGACTAAGTCCAACTACTGATTCTTCTGACAGTATTAATGGCCATTTGATGAACTATATCAGTAAAAACTTGTTCACGGATCCTGTTGATTTTTATGATGCCATTGATGATTCTATCATTGGGAAGGGTTTTGATGATAAAATCCTTCGTCTTCTTGAAGTTGCATGTGACTGTGTTAAGAGATCTTTGAAGCAAAGGCCAAAGATGGTTGATGTGCACAAAACTATAAGCGCCATGTGGGAGGGCTACAAACCCTGGTTTGATTCTGAAAGGCTCAAACTGTCTACGGGTTGCGCTGACCATAGAACATGTATCACCGACATTGAATGTATTGAATAG 1761 0.4009 MAGFGAESEIDCLQTIKKMDPFNHLSSWDFESNIEGGICIFSGVECWNHLEDRVISLWLSNMELKGQFPRCIEDFTWLQTLDLSHNELSGYIPNDIADKLPYLVTLDLSNNYLSGEIPKGIANLSGLFSLLLDGNQLTGQIPQEVGLLPFLRDFSVANNLLEGPVPVFVSNVNVSLSYANNSGLCGGVLGSCDESLFGRSFWYSLIIGFVSSATSVIVSFMYSYAPWTEFKKMSNAIHPLIKTRQEAELLPLDLQGSKELTILLERLITRMSYKELCKATDYFCTDNMLGIGTTGIMYKAKVSNNCFLAVKRLYDADKYKREFLLEIMIPGRHRHRNIAPVHGFCIEKQERVLVYEYISNGRLSDSLQSDEGHQSIKIEWPERIHIALGLARGLSWLHKRCKIVHLNLDSECVLLDKNFEPKISNFGKAKFINQTVEDHVRLKLFLIDVLGGKDSVERDVYDFGIILFELLTGKRLSPTTDSSDSINGHLMNYISKNLFTDPVDFYDAIDDSIIGKGFDDKILRLLEVACDCVKRSLKQRPKMVDVHKTISAMWEGYKPWFDSERLKLSTGCADHRTCITDIECIE 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00650 586 SUPERFAMILY L domain-like 36 196 - -
Spst6g00650 586 SUPERFAMILY Protein kinase-like (PK-like) 264 549 IPR011009 -
Spst6g00650 586 FunFam Nuclear pore complex protein NUP107 7 167 - -
Spst6g00650 586 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 26 175 - -
Spst6g00650 586 Gene3D Phosphorylase Kinase; domain 1 252 357 - -
Spst6g00650 586 ProSiteProfiles Protein kinase domain profile. 283 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00650 586 Pfam Leucine rich repeat 78 137 IPR001611 GO:0005515
Spst6g00650 586 Pfam Protein kinase domain 286 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00650 586 Gene3D Transferase(Phosphotransferase) domain 1 358 562 - -
Spst6g00650 586 Gene3D Ribonuclease Inhibitor 9 192 IPR032675 -
Spst6g00650 586 PRINTS Leucine-rich repeat signature 78 91 - -
Spst6g00650 586 PRINTS Leucine-rich repeat signature 100 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00650 Spst-Chr6 5871801 5873779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00650 1 553 Receptor kinase-like Gene Family AT1G69990 34.276 7.81e-99 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst6g00650 Pkinase 6.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00650 - - gmx:106795644 931.398